| Id Trinity | TRINITY_DN46046_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_418579 |
| Sequence | CTTTAGTTTAAAAAATTTAACAATTCTGGAAACAGCATAAGGAGGAAAAATCAGAAAACGCAAACGCTTGAAAGAAAGAAGCGCGACGATGCTAAACCTT TTCAAACGAGGTAGGGAAAATCCCGCCGACGCCGAACCGCCATATGCGGCGGCGATACCATCTGCTTCTCCGGTCACTGGTCCGGCGAGACCAATACGGC TTGTCTACTGCGACGAGAAGGGAAAGTTCCACATGGATCCGGAAGCCGTCGCGACGCTGCAGCTTGTAAAGGATCCTATCGGCGTTGTTTCTGTCTGCGG CCGTGCTCGCCAAGGCAAGAGCTTCATCTTGAACCAGCTTTTAGGAAGGAGTAGTGGATTTCAAGTATCACCAACCCATCGGCCGTGTACCAAAGGGCTT TGGATGTGGAGTACGCCTTTGAAGAGGACCGCTCTTGATGGAACAGAATACAATCTCTTGCTATTAGATAGTGAAGGAATAGATGCTTATGATCAAACGG GAACATACAGTACCCAGATATTCTCATTAGCTGTCCTATTGTCTAGCATGTTCATTTATAACCAGATGGGTGGTATAGATGAGGCTGCCCTTGATCGTCT TTCTCTTGTCACTCAAATGACAAAGCACATTCGTGTTAGAGCATCTGGGGGAAAGACTTCTGCATCAGAACTTGGACAGTTTTCCCCAATTTTTGTTTGG CTCTTAAGGGACTTCTATTTGGACCTAACAGAAGATAACAGAAAAATAACACCCCGTGATTATTTGGAACTTGCTTTGAGGCCTGTCCAAGGGAGTGGAA GAGATATAGCTTCTAAAAATGAGATTCGAGATTCCATTCGGGCTTTATTCCCAGACAGGGAATGCTTCACCCTTGTTCGACCTTTGAATGATGAAAATGA TCTACAGCGACTGGAACAGATATCGTTGGACAAGTTTAGACCTGAATTTCGATCTGGCCTTGATTCTTTGACCAAGTTTGTTTTTGAGAGAACACGGCCA AAACAAGTTGGTGCAACTATGATGACAGGCCCAGTATTGGTAGGTATCACGGAATCTTATCTGAATGCACTCAACCACGGTGCGGTGCCTACAATTTCTT CCTCCTGGCAGAGTGTTGAAGAAGCTGAGTGTCACAGGGCATATGATACTGCTACTGAAGTGTATATGTCTTCTTTTGATCGCTCAAAGCCACCCGAGGA AGCTGCTTTGAGGGAAGCACATGAAGAAGCAGTTCAAAAGTCGATGGCTGCTTTTAATGCTAGTGCTGTAGGAGTTGGTTCAGCCAGGAAGAAATATGAG GGGCTTCTTCAGAAATTCTTCAAAAAGGCTTTTGAGGATTATAAGCGGAATGCTTTCATGGAGGCAGACCTACAATGCTCAAATGCCATACATTCTATGG AGAAGAGGCTGAGGGCAGCTTGCAATGCTTCTGATGCAAGGATTGACAATGTTGCAAAGGTTCTTGATGCTCTTTTAACTGAATATGAAAAGTCAATTCA AGGTCCTGGGAAGTGGCAGAAACTTGCTGTCTTCTTACAACAAAGGTTGATGTATATGTTCTTCTGCAGTTTTTTATTTATTTGTCTAAACCTTTTTGCG TGTATTTTAACAATTTACTTGTTGCTGACAATAGTTTTGAAGGCCCAGTGCTCGACCTTACCAAGAGGCTGATAGATAAAGTTGAATCAGACAAGAATGC TCTTGCTTTACAGTATCGGATGATTGAAGACAAAATGTCCCTACTCAACAAGCGGTTGGAAGCTACTGAAAATGATAAATCTGAGTACATTAAACGATAC GAGGATGCTGTTAATGATAAGAAAAAACTAACTGATGAATACATGAATCGCATTACTGATCTGCAGGCCAACCGTCGTTCATTGGAAGAGAGATATTCCA GTGTGTTAAAAACTTTAGATTCTACTAAGCATGAATCTGTGGATTGGAAAAGAAAATATGAACAGGTTTTATCGAGGCATAAAGCTGAGGAAGATCAGGC TAGTTCTGAAATTGCAGCCCTCAAGTCCCGTGGTGCTGCTGCTGAAGCAAGGTTATCAGCAGCTAGGGAACAAGCACAGTCTGCTCAAGAGGAGGCTGAA GAGTGGAAGCGGAAGTATGATATTGCTGTTAGAGAAGCGAAGGCTGCTTTAGAGAAGGCAGCTGTTGTACAGGAGCGCACAAACAAGCAGACTCAGTTGA GGGAAGATGCTTTAAGAGAGGAATTCTCCGTTACCTTGGCTGAAAAAGACGATGAAATCAAAGAGAAGACTGCCAGAATTGAGCATGCTGAGAAGTGTTT AGCAACTTTGAAGTTAGAATTGAAGGCTGCCGAGTCAAAGATAAGGAGTTATGAAGCCGAAATATCATCACTAAGGATTGAAATTAAAGAGTTGAGCGAG AAGTTGAAAACTGAAAATGCTAAGGCCCAGTCATATGAGAGGGATGCACTTGTGTTTCAGCAGGAGAAAAGCCTCCTAGAGCAGAAGTATCAATCTGAAT TCAAGAGATTTGAGGAGCTTCAAGAAAGGTGTAAAAATGCTGAAAAAGAAGCTGCAAGGGCTACTGAGGTGGCTGATAAAGCTCGGGTTGAAGCAGTCAT GGCTCAAAAGGAGAAAAGTGAGATGCAGACACTTGCAATGGAGAGACTGACGCATATTGAGAGAGCTGAAAGGAAAATTGAAAGCTTGGAGAGGGAGAAG GATAATTTGGAAGATGAATTGCAGAGAGTAAGGTATTCAGAGAATGATGCACTTACCACTGTCGCGAAACTAGAAGAAAAGGTGCAACAGAGAGAGAAGG ATTTGGATGCACTTTTGGATAAAGATAAAACGCACAGGCGAAATAATGCTCAGATTCTTGAAAAGCTTTTGGAAACAGAACGTCAAGCACATACACAGGC AAATAACCGAGCCGAGTCTCTCTCTCTACAGCTACAGTCTGCACAGGCCAAAATTGACTCTCTCCATCAGGAGTTGACCAAGTTTCGACTGAATGAAACA GTATTGGACGGTAAGCTAAAAACTGCTTCCCGTGGTAAACGTGTTAGGGTAGATGATGAAATAGGTGCAGAATCTTTTCAGGACATAGATTTGATGAACC CTAGAATTGTAAGGACAAATAAGAGATCTAAGAGTACAATCAGTCCTCATCAGGACACACACCCAGAAGATGGTGGTTCCACCTATATAGGTGCTGAGGA TGATCAGAGTCAGCATACAAACCAGGACTATAAAAAATTTACAGTGCAGAAGCTTAAACAAGAGCTGACCAAGCATAACTTCGGCGATCAGCTACTTCAG TTGAGGAATGCCAAGAAGGAAGATATCCTTGCCCTTTACGAGAAATGTGGTCTTCCTAAGTTATAGTTGATTATGAACAGAACTAGTATAGGTATGATGC ATGTAATCACCTGTGTGGGTTTGTGTAATTTTCATCCATGCCATGGTTGCTTAAATTTAGACTAGAGATGCTGTGTGAACTGTGGAATTAACATATTTGT TTCAGCGCTTTTACATATTGGGTGTGTTCACTTCAGTTTGCTAGTAAAGATAATCGGATACGCCATAAAATATTTTGATGGCTGGACTTTTATTTGTTTA GTGCTGAGTGTGTTGTATTTTTGTATTTAACATTTGTTAGCTTGAGCACTTCATGTGCACTTTAGAAGGTGCCAGGTACCCTCCAAAACCATATGTATGA TCTGAACTTCAGATTGTATAATTTAAAGCAAAAGATTGATGTTACATGCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_141937; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418579
| Blastp | - |
|---|---|
| Blastx | Guanylate-binding protein 2 from Homo with 34.24% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002289) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416980.1) |
| Pfam | - |
| Rfam | - |
| GO | - |