Ll_transcript_418041

• Id Trinity: TRINITY_DN46047_c1_g1_i2
• Name Transcript: Ll_transcript_418041
• Sequence: AAGGAAATGAACAACTAAAAGCTAAAAACACAGAAACAAATAGTATCACTCAAGTGGGAGTTACAAAACAAAGTATCTGAGTGAGTTTACATTACAATAA AAGAGAAACAAAAATCAACAACTGGGTCGTGCTTCTCTCTCTGTATTGAGTTTTTTTCTTCTCCACTTTTATAAAATCACCAACTATAAGAAGGTATGGA TATTTTAGACTGTAGAAGGGTTGTCTTTGACAAAATTCATAAATTTGAGCCTGAATATGCTTCAGAGATTATTGGATTACTTCTATTTCAAGACAATGGT GAGGAAGAAATGGCTATGTTGGCTTCATGCCATGACTATTTCATCCGCAAAGTAGCCTTTAAGGCAAAAATGGTCCTTCAGGGATTGGCTGCTAAACCTG TCCTATTTCCAATCTCACCTCCCCTCAACAATGAACAAGGTTGGAGCCATTTATCAGCAATCTCTCCAATAACTCCTACTTCGCCACCAAGCTTTCAGGT TCCGTTCCCATATTGGAATCCACATTCTGTGAGCAACACCAATCCAGACACAGTTACGAAGCAGACACGGTTATCCAGTTTGGAGAATTTCATAGAGCCT GTGAATACTGAGACCCGAGGGATCACTCATGATTACTTTGGCTTAGATGCTTCTGCTGCCAATTTCGGTGTAAAGGTTGGTAGAAGGCATTCAAGACTGT CTGAATTTCCAGTCATAACATGTCACTATTTCAAAAAGGGGTTCTGTAAGCATGGAACTAGATGTAGATACTATCATGGTCTACTTGTCTCAGAGAGCTT CCCTCGGATGCATAGAAATGATGCTATTAATGAACGTCAGATGTTTTTACCTGGGTCACTGGCACAGTTAGAAACAGAAATTGTTGAGCTCTTAAAACCA AGAAGAGGAAGTCCACTGTCAATTGCTTTGTTGCCAATGGCATATCAGGGAAAATATAACAAGGCACTGCAGGCTGATGGTTACTTAACTGAGAGCCAGA GACACGGCAAGTCTGGATTTAGTTTGACAAAGCTTCTTGCCAGACTGAAAAATAGTATTCAGCTGATAGACGGACCTCATGGACAGCATGCAGTGGTTCT GGCAGAAGATGTTCCAAAATACATGCAGAATGGAGATTTTGGTCAGAATATTAGTGCAGCGCAACAGATATATTTGACATTTCCAGCTGAAAGCACTTTC ACAGAGGATGATGTCTCAAACTATTTCAACACATTTGGGTGGGTTAAAGATGTAAGGATTCCTTGTCAGCAGAGAAGGATGTTTGGATTTGTGACATTTG ATGATCCAGAAACTGTTAAGATGATTTTGGAAAAGGGGAATCCCCATTATGTTCATGGGTCTCGGGTGCTTGTCAAACCTTATCGAGAGAAGGCAAGGGT TGTTGACAGGAAATTCCGAGATAGATTTGAGAACCATAACTGTTATTCACCACACTATGTAGATTTCCACTCAGAATCTCCCTTGATTTCAAGAAGATAC GGAAACCATAGTTCTCTAGTGAGACAGCTGATGGAAGATGATAAGGCCCTGCAGCAGAGGAGATGCCTTGCAGAGCTGGAATTTGCTAAAATTTCTTTGT CTAGTTCACCCCAATTTAGCACCTGCATGGATGGATCAAGGGTTTCAGGTGGTGTGTGATATTATGGATTGCATTGTTTGATATCAAGCTTCAGTATATT TTTCTTGGCAATACACATGGCTCTCTTATTGATTATTGAGTAAAATACATACTAGGATCTATAGTCAGAATGGTTAGGGAGAGATAACAAATCTGCTACA AATTAGAGAAAAAAAATGAAGGATCAAAACAAGAGATACAAAACAGCCTAGCTAACAACATCTGAAACAGTTGACACAAATTTTATTGTAACCAATAAAT CTTCCTAACAACATGTTATGCAGATGACCTTAATTTCAAGCCTGCAGAATCTTTCAGCTCTGCGCTGAATGAAAAACCTAATCAGATAGAGTCCGATTCC TCTGATGAGAACAGCAGTCAAGAACTCAATCTCCCGGACAGTCCATTTGCATTTCCAATAGAAAGTGGTATTGAAGCAGTCATGTAGTTTCAGAAAATCA TACAGGAAAAGTATAGAGTTAAGGTGAAAGGCAGCAACTTTATTTTAATACATAGCCATTCTATTGTTCCATTTTCGCAACTAGCTCGGCAGTTTAGTCA ATGTCTCCAGCAAGTGGATGAAAATAACTTCCCTCTTCACAACTTGAATTGGAGGAATTAACATACTTTCAGTGATATATGTAAGAAGGTTATAGATTTC CATTATAGCGTGATGGAAAAAGCTTTGGTTTTTATAAGATTATGTAGTTAGGAGCTTTATGAAGTCCTTAGTGGATGAAAATAACATGTTATATGTTCTC ATGTACTTGTGGGGTTGTTCTCAAATTAAAACACAATGTGTGTTATTTTTAGTTACCTTATCCTCCTCTGAGATTCTTACAATTGAGGACTAAGACATAA TACACATTATGTTTTGCTTGAAAAACAACATTGCAAGTAACAATGGAACTTTATCGTTATGTCAAATCAGTATCCAGTTGTCATTAGATTGCAGAACCTT TTTTAGAATCTATGGATGAACTGATTTAAGTACTATGAACAACTTCAATAATGTTCTTTTTTTGTTGTTTGTGAAAATTATGTTTTCATTTTTATTCATT AAAAA
• Tissue: pods
• Gene name: LI_gene_141941;
• Additional information: details;

Expression of Ll_transcript_418041

FPKM

• PAB: 0.1
• PNAB: 0.7
• PS1: 0.6
• PS2: 0.1
• PS3: 0.3
• PW1: 0.5
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_418041

• Blastp: Zinc finger CCCH domain-containing protein 18 from Arabidopsis with 46.83% of identity
• Blastx: Zinc finger CCCH domain-containing protein 18 from Arabidopsis with 46.83% of identity
• Eggnog: zinc finger CCCH domain-containing protein(ENOG410YDMG)
• Kegg: Link to kegg annotations (AT2G05160)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460539.1)
• Pfam: OST-HTH/LOTUS domain (PF12872.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;