| Id Trinity | TRINITY_DN46047_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_418049 |
| Sequence | AAGGAAATGAACAACTAAAAGCTAAAAACACAGAAACAAATAGTATCACTCAAGTGGGAGTTACAAAACAAAGTATCTGAGTGAGTTTACATTACAATAA AAGAGAAACAAAAATCAACAACTGGGTCGTGCTTCTCTCTCTGTATTGAGTTTTTTTCTTCTCCACTTTTATAAAATCACCAACTATAAGAAGGTATGGA TATTTTAGACTGTAGAAGGGTTGTCTTTGACAAAATTCATAAATTTGAGCCTGAATATGCTTCAGAGATTATTGGATTACTTCTATTTCAAGACAATGGT GAGGAAGAAATGGCTATGTTGGCTTCATGCCATGACTATTTCATCCGCAAAGTAGCCTTTAAGGCAAAAATGGTCCTTCAGGGATTGGCTGCTAAACCTG TCCTATTTCCAATCTCACCTCCCCTCAACAATGAACAAGGTTGGAGCCATTTATCAGCAATCTCTCCAATAACTCCTACTTCGCCACCAAGCTTTCAGGT TCCGTTCCCATATTGGAATCCACATTCTGTGAGCAACACCAATCCAGACACAGTTACGAAGCAGACACGGTTATCCAGTTTGGAGAATTTCATAGAGCCT GTGAATACTGAGACCCGAGGGATCACTCATGATTACTTTGGCTTAGATGCTTCTGCTGCCAATTTCGGTGTAAAGGTTGGTAGAAGGCATTCAAGACTGT CTGAATTTCCAGTCATAACATGTCACTATTTCAAAAAGGGGTTCTGTAAGCATGGAACTAGATGTAGATACTATCATGGTCTACTTGTCTCAGAGAGCTT CCCTCGGATGCATAGAAATGATGCTATTAATGAACGTCAGATGTTTTTACCTGGGTCACTGGCACAGTTAGAAACAGAAATTGTTGAGCTCTTAAAACCA AGAAGAGGAAGTCCACTGTCAATTGCTTTGTTGCCAATGGCATATCAGGGAAAATATAACAAGGCACTGCAGGCTGATGGTTACTTAACTGAGAGCCAGA GACACGGCAAGTCTGGATTTAGTTTGACAAAGCTTCTTGCCAGACTGAAAAATAGTATTCAGCTGATAGACGGACCTCATGGACAGCATGCAGTGGTTCT GGCAGAAGATGTTCCAAAATACATGCAGAATGGAGATTTTGGTCAGAATATTAGTGCAGCGCAACAGATATATTTGACATTTCCAGCTGAAAGCACTTTC ACAGAGGATGATGTCTCAAACTATTTCAACACATTTGGGTGGGTTAAAGATGTAAGGATTCCTTGTCAGCAGAGAAGGATGTTTGGATTTGTGACATTTG ATGATCCAGAAACTGTTAAGATGATTTTGGAAAAGGGGAATCCCCATTATGTTCATGGGTCTCGGGTGCTTGTCAAACCTTATCGAGAGAAGGCAAGGGT TGTTGACAGGAAATTCCGAGATAGATTTGAGAACCATAACTGTTATTCACCACACTATGTAGATTTCCACTCAGAATCTCCCTTGATTTCAAGAAGATAC GGAAACCATAGTTCTCTAGTGAGACAGCTGATGGAAGATGATAAGGCCCTGCAGCAGAGGAGATGCCTTGCAGAGCTGGAATTTGCTAAAATTTCTTTGT CTAGTTCACCCCAATTTAGCACCTGCATGGATGGATCAAGGGTTTCAGATGACCTTAATTTCAAGCCTGCAGAATCTTTCAGCTCTGCGCTGAATGAAAA ACCTAATCAGATAGAGTCCGATTCCTCTGATGAGAACAGTCAAGAACTCAATCTCCCGGACAGTCCATTTGCATTTCCAATAGAAAGTGGTATTGAAGCA GTCATGTAGTTTCAGAAAATCATACAGGAAAAGTATAGAGTTAAGGTGAAAGGCAGCAACTTTATTTTAATACATAGCCATTCTATTGTTCCATTTTCGC AACTAGCTCGGCAGTTTAGTCAATGTCTCCAGCAAGTGGATGAAAATAACTTCCCTCTTCACAACTTGAATTGGAGGAATTAACATACTTTCAGTGATAT ATGTAAGAAGGTTATAGATTTCCATTATAGCGTGATGGAAAAAGCTTTGGTTTTTATAAGATTATGTAGTTAGGAGCTTTATGAAGTCCTTAGTGGATGA AAATAACATGTTATATGTTCTCATGTACTTGTGGGGTTGTTCTCAAATTAAAACACAATGTGTGTTATTTTTAGTTACCTTATCCTCCTCTGAGATTCTT ACAATTGAGGACTAAGACATAATACACATTATGTTTTGCTTGAAAAACAACATTGCAAGTAACAATGGAACTTTATCGTTATGTCAAATCAGTATCCAGT TGTCATTAGATTGCAGAACCTTTTTTAGAATCTATGGATGAACTGATTTAAGTACTATGAACAACTTCAATAATGTTCTTTTTTTGTTGTTTGTGAAAAT TATGTTTTCATTTTTATTCATTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141941; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418049
| Blastp | Zinc finger CCCH domain-containing protein 18 from Arabidopsis with 39.71% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 18 from Arabidopsis with 39.71% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG410YDMG) |
| Kegg | Link to kegg annotations (AT2G05160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460539.1) |
| Pfam | OST-HTH/LOTUS domain (PF12872.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |