Id Trinity | TRINITY_DN46049_c2_g2_i3 |
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Name Transcript | Ll_transcript_417622 |
Sequence | TGAGAATTTACATAAAGCACAAAACAAATAATAAAAATTGACTTTGTAAGATGAAGATGAAAGTAACAAGAGTATGGAATATAAGATGATAAATCTAACT GTAGAAAAAACTTATCTATATATGTAAATTGATAAAACGTTATTATTGATTTATGTGCAAGTGTTAAATATTAAAATTGTTGTGAAGAGAAACGAGAGCT TATAAGAAACATAAACAGAAGAGAAGATAAAGAATAGGAAATTGAAATTGAGATGGGTGTTATCGAAGAAGCTGATACTTCATCCAAACAACAGAATCTC TTCCACCTTATCAAACGCTATGGATCTTATCTCTCTCTCAACATCTCCAACTTCTTCTCCTCTTTCTCTCTCTACAACCTCGATATACGCTCTATTGGGG CAATTGCTGGCCTTGCTGTTGCAATTGTTTTCACCTGGAGGCTATTGAGATCTCCTGCTGGAGGACCTCAACAAAGGCGACAGAAACGGCAGGGTTCTTC ATCTAGTAATCCTGGCCTCACTTCTCATTCAGATGCCTCTGTAGTTCCTTCTGAAATCTATGATTCAAGAGCACAGAATGTTGTTGACGAGTTATTCCAG CCACTCAAGCCAACCTTGGGGCAGATAGTTAGGCAGAGGTTGAGTGAAGGAAGAAAGGTTACTTGTCGTCTTCTCGGAGTGATACTTGAGGAAAGTAGTC CAGAGGAGCTTCAGAAACAAGCAACTGTGAAGTCCTCTGTGCTGGAAGTATTGTTGGAAATAACAAAGTTTTGTGATTTATACCTCATGGAACGAGTACT GGATGATGAAAGCGAGAAAAGAGTTCTTGTAGCGTTGGAAGAAGCTGGAGTATTCACTTCAGGTGGTTTAGTCAAGGACAAGGTATGTGAATATGCCTCA AACACATTTTTTTCTTGACAGGACTTAGATATCTTCTTTCCAAGAAGAATTGTGATGTGATATGTTGGGAAGATGGATACAAATCTATATGGAATGGTGG AGAAGAAAATGAATCTCCTGTTAGTCCAATTTGTTTTTATTTGGTCATTTGCTGCTTGTTTCTTAGTATTCTTTTCAGAAGGTCCTTGGAACCTGAAATT CAGAAGAGTTTAATATGTATACATCGACATACTCAGTATCTCTTGATTCATGAATGCTGCAAATATTCGCGAGTCTGAAAAACCACTTCTGGATTCTGTG TCTTCTGTTTCATCTCTTGTACCTATTTGCAGGTTCTCTTCTGTAGCACAGAGAATGGGCGAACATCATTTGTTCGGCAATTGGAGCCAAATTGGCATAT AGACACAAATCCTGAAATTGTTACTCAGTTAGCTGTATGTTACTGTATATCTCTACTTCCTTCACCAAGTCACGGGATTTAAGATTTGGTGCAGTAAAAA AGTGTGGTTCTTAATGCAGTTAGCAAATCCGAGCCATTGGAAGAAGATTAGGTGGCCGGACTCGGATCTCACCATATCGAATTCAAAACTCAATATCTCG GATTTGCTAATTGCACTTACGGCACTGGATTATAGTCCCAAGTGTTCATTTTATGATATGATTGTCATATAATCATTTATGAGGCTAAAATTTCACCTTG ATTCATATGAACTTATTTATAATGTCTCTAACAATAAACGATGTTGCAGAGGTTTATCAAGTATCAAATTCATGTATCTCCTGTTAGAAGTGAACGAAGT GCAGCTAATGTGTTCAGTGCTATTTCCCTAGAGCAGTTCTTTGGATCCATATGAAACTGAAAGCACCTCAACCCAGATGTTTAGGTTAGATTATCTTCAA CCTTTGTTTATTTTCCCATGGTATGAAATTTGTGCATTGGATTGGATGGGATCGGATCTAAACGTTTTTAACTGGCAAGGTGTTTCTAAATTGTAACTGA AGATAGTTACATTACATAATAATGGCATCATGAACTATTTATAATCATTGTCTTAACATGGACAACTTTATTTACTCTTCACTAAAAGGACTATGG BLAST |
Tissue | pods |
Gene name | LI_gene_141958; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417622
Blastp | Peroxisome biogenesis protein 22 from Arabidopsis with 59.26% of identity |
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Blastx | Peroxisome biogenesis protein 22 from Arabidopsis with 60.56% of identity |
Eggnog | peroxisome biogenesis protein 22-like(ENOG410XXC3) |
Kegg | Link to kegg annotations (AT3G21865) |
CantataDB | Link to cantataDB annotations (CNT0000314) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458481.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |