| Id Trinity | TRINITY_DN46061_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_417420 |
| Sequence | GTTTTTTCTTCTTCTTTCATGCGCTGTGCTACGTTAGTATTTAAAGCTAATTTGAAAACTCAATCCCCATTCCCGCTTCTTCCTCTTCTCTCTCAAAACT TTCACTTTCATTACGGAATCTGAATTTTCTCGTTCCTCTCTTCTCAATCAAACAAAAACTATATCCCTCTCCATCGTGAATCGTTACTCACTCGCATCTA GTTAGGAAGGTTTTTTAATTTGAATAAGGCAGTTCGTTTTAGCTGAGGCGTGAATCATAAATTTGACAACAACGAGGAATGGCTGAACAGCACAAGGAAT CCTCATCTGCAGATTCAAAGGAAAAAAGTTCATTGCTAGATGACAAAATTGGAAAGGAGTTTCTTAGCTCCTGGAAATCCATGTCAATGGCTGATGATGA TGCAATGGACTTTAGCTTTGACACTGTCCCTAAAGGGAGAAAAAAGACATTTGACTTTGACAAACTGGACATGAATTTTAATCTGGATGATGACTTTGGC AAGATATCATCATTTAAGGTGGACATGTCCGACCTTGATTTTACATGCCCACCCAAGAACTCTCCCCAGTCTAAGGATAAAAAAGGAGAATCTTCTGGTA CAAAAGCAGGGAAACAAGATGGGTTTAATTTCAGCTTTGATTTTAATGAGTTGGATAGCTTCAATCTTGACTCAAGCTCAATAAAAGGAGATACTAGTTC CAACAGTAACCTGAGAAAAAAAGGGGTTAATACAGAAGGAAGTGATAGTGAAGGTCCTAAAAAGCCTAAAATCAATGATGATGAAAGTGGTCATGCATCT AACAACAGCATGGCTATGAAACCTCCAGTATCAGAGAAGCTGGAAACTTCGAAGGTTGATAATGTGGTTGGTAACCTTGGGAGTGTAACTTCCGGAAAGG GTGCTTTTGCATCCAAGTTTTCGTCCTCCGGGATCCCGGACATGCCAATTGAGATCCAAACTTCAGGTATAAGTAAAACTATAAGAACAAAAGAAATGGA TGAAGAAAGAGACTTACCTGAGAACACAAAGTCAGCAGAATCAAAACTTGAGCAGGTTATCACTAAGGCACCTTCTCAGCCAGCTTGTCAGAATGATTCA GAGCAAGATACTGTCTCAGAACAGCATAAGATGATTTCATCTGGAACAAAAGTAATTAATGTTTCAGGTAAGAAAGAAAAGGTTGCTGATAAGGCAACCT GTGTGGATTCTGAGCGTGTAGACTTACAATCAGAGCAGCCATCCCTGGCTCTCGTCACTAATTCTGATAGCAGTGTTGGAGAAGCAACTAATCTAGGTAG CAGTGCCGAAGAAGTTACTAATGACCCTCATAAAAAGAATAATGATATAAGTTTTGAAAATATTTCTAAAAATGCCTTCAAAAAGATTTCATGTGACAAT GACGTTATAGAAAACAAAAAACCAGCTTTGGAGTGTCATTTGGCTTCAGAAACCAGGATGATGTTAATGAAAGACAAAGAACTCCAAGGTATGCAGCCAA ACATGTCCAGAAGGCCAGAGGAAAAGTGCTTTTTAAAGCATCTCTCATCAACAGCTGGGACAAAGGGTATCTCCTTTAGCAGCCAAAAAAGTTGTGACAT GAGCCCGAGGGAGAGCTACAGATCCAACGATACACAAATTGGAAGCAAATTGGTAAGGGATTCACTCCCAGGTTCTGACAAATTAAATAGAGATGGACTG GCATTGAATCACAGCACAGATGATCTTAAAAGTTGTAGTAATGGCAGGGAGAGCATTGTTTCTGATCTTATGCCAAGTGCAAGCAAGTTGGCTGGAAATA TGCATTCATTCCACGACGAAGTACTTAAAAGCAAGGCCATAATGCTAGAAACTGGCAAGTCAACTAAAGAAGTTAATATGTTGAGTTCTCAAGTTAATCC TTCCTGCTTAACAGAGAAGATAGCTAAAAACACTACCCAGGTGTCTGTAAAACCTAAAGCTGAAGTTTTAGGCAAGGAGTCTTCTCAGAAACCAAGGATT ACTTCCATAGAAGGAAATAAAATTTCTTCTTTTAAAACTGGAAAGATCACTCATGCTCTGTCTAGCTTAAAGGCGTTAAGGAACATTGGGGCAAACATGG TTTTAGCAGCTCCTTTACACCAAAAAGAAGCAAACTCCAAGGTAAAATCTGGACAAAATACTGAGATACAGAGCCTTACAGCATCAAAGAATGACCATCT CACCACCAGTGGCGACAATCAGAAGCCTCAAACACGATTCTTGAAGAGGAAAGCTACCGAGGTTTCAGAAGTAGATTTAACATCCTTGAGGTCCCTGAAG CGCCTATCTCAGTCTCCTAATAACGACAGGTCCCACTGAACAAATTGATTGTTTTACTTTTTCTTTTTTGGTAGACTATTTGTACTTTCTTTGATCAGTT CTTATGGACAAGTAACATAATTCTAAACACCTTCAGAAATTTTAAAAAATCTTCAGAAGAGGTCGTTCAACAGGTATATTATCAAATCTTTTATCTGATG TGTTGTCATATATTTAATGATGGCTGATAAAATGCAAGCGGGTTTGGGGATCCTAAGTATAATATTTGTCCATACTAGTTTCCTTTTCAAAATATATATT ATCCGAATTTACTTCCATGGGAGCCAGGTAGAGAGTAAGCCCCACAACATGATCTACAATCATCCAACCTTAGGACTTGAAAGTCCATCAGATATTAAAG TGATGGAAGTGGAAATATCTGATTCTGTACTGATGGAAGATAACAGCAATGTTGAAAAGGCTGAAGCATATATGAAGGAACTTGAAGATATCTGTAACAT GCTGAAAAAGAAGCGTGAGGAAGCAAAAGAATTATTAGTTCGAGCCATTGTGAACGACAATAACTTACTGATGCTTAATCATCCCATTTATGAAGAAAAA ATATCCTCCCACTCTTCTTTTTTATCATTTCTTCTTTGTTATTTATTTATAGATAACAAAGCTGGTTATTTCCTTAACATTTCTGAACATTTGGAAGGTT CAAAAATTTGCTTCCGAATTGAAGTCTAAGGGGATTCGACCTTGATATGCAGGAAATTGTTGCACTCGGGAGGTACGTATAGAATACTAATAGATCTACA GAAATTTCTTGGTTTGAGATGCAGCCTATTCTGGACTTCAAATTTGTCAGATTACTAGTCATCATTTGAATTTAAGGACCAAAACATTTTATCCTCCTGT GTCGGCTGAACTTGACAAACCTTTGCCATTTCATGGGTTATAAGAAGTCCATTGTGAAACGGTTTGTATGTGCTGTTGGGAAATAAAATTTGGACTCTTA CACAATGGGTGGCGAAATCAAAAGAAAAACAAAGTGGAAGCTACTTTTTGTTCGCATACATGACAATGGAGAATCATGTACGATTTGGTCGGCTTAAGAT TCTCTAAACTTGATTGTAGTAATAAGAAAATTAAAAAAAAGGTGTACTTCCTTTGTCCTTGTTATCCCTTTGGCTAAATCACTACATGTTGAATCTCTTG TTCTAGAGTCTGGCATTCTACATGTTAAAAAAAAAGGTGTACTTCCTTTCGTCTTTGTTATCCCAATTTCCTTCCCATTTGAAAGCAATTTCTTCCGGTA GCACTTGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_142037; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417420
| Blastp | Uncharacterized protein At4g18490 from Arabidopsis with 41.74% of identity |
|---|---|
| Blastx | Uncharacterized protein At4g18490 from Arabidopsis with 61.97% of identity |
| Eggnog | NA(ENOG410YV1B) |
| Kegg | Link to kegg annotations (AT4G18490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424568.1) |
| Pfam | - |
| Rfam | - |
| GO | - |