| Id Trinity | TRINITY_DN46065_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_417811 |
| Sequence | GTTTCTACCAAGCAATTCTGAACCATGAACGCATGTGTTTTTTCTTTCTCTTCAATGATCTTCCCCAGATTCCACCGTTACTTACGTTTCTCAAATCCCC TCAATCTAATCTCTCCTTCATCCTCATCTATTATATCTCTTCTCTCCAATCAAGTTTCTTCTCCTATCACCACTGATACCGCCTCCGACCACAAAAACGC ACCTTGGCTTATTGTCGGCCTCGGTAATCCTGGCAAGACTTTTAATGCTATCCGCCACAATGTCAGTACCCTCATGTCCATATCATTCCATTATTGATTA CTTTTTTCGGTCTAACGGACAACGTAAAACTTTGTCAAATATTTAAGAGGATTAAGCCGATATTTAAAATTCAAACAGACAGAAAAACTTAAGTCTGTAG TTGATAATTGTTGCTTTTGTTGGGACTAGTTTTTTATTTAGAGGTCGCCAAAATTTTTGTGCATACCAATTTCGTCCCTGAAATGATCCCGAAAATATCA AATGCATGTCTAATTAATCTCATTTAGCATTTTTACCCGCATTTTGCCTCGTATTCGTGATGTTTGTGTGGGGATCAAATTGGTACACGTGACATTTGGT AACAGCTCTTTTATTTAATAGCAGTGTGTGCTGCTGTGTAAGTTGGATTGGGACTCATTTCAATTTTCCTTAATTGACCTTGTATTGGAGTTTTCTTTCA GGTGGGTTTTGAGATGGTTGATGCAATAGCAGAAGCTGAAGGAATATCTATGAGCAGTGTTTCCTTCAAAGCCCTGTTTGGAAAAGGTTATATAGGTGAC GTGCCGGTTATACTTGCTAAACCACAGACTTTTATGAATTTAAGTGGTCAATCTGTTGGGGCCATAGTTTCATATTACAAGATTCCATTGAAGCAAGTAC TTGTGATCTTTGATGACTTGGACTTGCCTTTTGCTAAATTGCGCCTGCTACCAAAGGGTGGACATGGAGGTCACAATGGGTAATTATAATCTTCCTCATT TGCACTCTCTTTTTGCTAAATTACAGCATCTGTGTAGGACTATAGGTCCAATTTGACATATCAACTTTATAAATTTACATGTTGGCTGTTGCTTTGAATA TCACGGCCAAGTTTCATCACATTTCTGAAAGTTAAATGTCATATTTGTCTTCCCCTTGGGTCAAAGGGTGTTTGAGCTGCTGTGTTGTACAAGTAAGACA ATATGCAATAGCAAACTTACAGTGAACAAGAATGATCTATGAAAAAAGTAAAGACCTCCCTTTCTCTGCTGACATAATATATACGGTAGGGATAAGTCAG TTTCCTTGTGTCATCCTTCAAATCACTGTAAGTCGTACTTGAGGCTAGTGATACTTAACATCATCTTTATTGTGTTAATTTATCTGGGTGATATTATACT CATTGAGTTCGTTTCTTGGTAAGCAAAAGACAAATGAAACATCACTCTTTTTGTTCTCTGTTTTTTGGCAGAATGAAGAGTGTCATTAATCACTTGAAAG GGAATAATGGTTTTCCGCGATTAAGAATGGGCATCGGACGGCCTCCAGGGAAAATGGATCCTGTAGCCTTTGTTCTTCGCTCTTTCACGAAACAGGAGAG GGCAGAGTTGAATTTTACATTACAACATGGATTAGAAGCCATTCGGATTCTTTTGCTGGAAGGATTTAATAAAAGTGCAACATTTGTTAATAGTGCCAAG GAGGTATAGCAAATTGGTTAATAAGTGATTGCTGAATTTAAAGATCCTTTTGGCAAATACAAAGTGATAGCAAACAGGACCACGTTGCAAGGTGATACAA ATTAACCCAAAGGACTATACTAATTCTCAAATATTTTATTAATTGGCTATACCTATGTTTCAGCAATTATTTATTCACCTCTTCTTTCAGAAAGCAGTTT CAGAATAGTGAATATTGATGTTATGGAATTACCTGTATCAGTGTATGTACTATGTAAGTTATGTTACATAACAATAAAGTCAAATTCTGTCTATAAAGAT GTCTTTGGCTGCCATAGTGGCAAATTTACCATTCGGGCGTACCTGGCCGTACAGTTTTGATGCACCTTTTAAACTATTTACCATAATGGTGCACTTGTGG GAGAGTCAGGAAGTGGTTGACAATTTTTATTGATGGTTTTTGATACAGTACTTGATGTTTGAGTTTCATTGACCTTACATAAATTCTAATTGGGCATGTG TAATTTATTTTCTCAAGCAAAAATAAAATTTATGGTGTTTTAGTTTCAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_142045; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417811
| Blastp | - |
|---|---|
| Blastx | Peptidyl-tRNA hydrolase, chloroplastic from Arabidopsis with 77.78% of identity |
| Eggnog | The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity)(COG0193) |
| Kegg | Link to kegg annotations (AT1G18440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_013447340.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |