| Id Trinity | TRINITY_DN46065_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_417831 |
| Sequence | GTTTCTACCAAGCAATTCTGAACCATGAACGCATGTGTTTTTTCTTTCTCTTCAATGATCTTCCCCAGATTCCACCGTTACTTACGTTTCTCAAATCCCC TCAATCTAATCTCTCCTTCATCCTCATCTATTATATCTCTTCTCTCCAATCAAGTTTCTTCTCCTATCACCACTGATACCGCCTCCGACCACAAAAACGC ACCTTGGCTTATTGTCGGCCTCGGTAATCCTGGCAAGACTTTTAATGCTACCCGCCACAATGTGGGTTTTGAGATGGTTGATGCAATAGCAGAAGCTGAA GGAATATCTATGAGCAGTGTTTCCTTCAAAGCCCTGTTTGGAAAAGGTTATATAGGTGACGTGCCGGTTATACTTGCTAAACCACAGACTTTTATGAATT TAAGTGGTCAATCTGTTGGGGCCATAGTTTCATATTACAAGATTCCATTGAAGCAAGTACTTGTGATCTTTGATGACTTGGACTTGCCTTTTGCTAAATT GCGCCTGCTACCAAAGGGTGGACATGGAGGTCACAATGGGTAATTATAATCTTCCTCATTTGCACTCTCTTTTTGCTAAATTACAGCATCTGTGTAGGAC TATAGGTCCAATTTGACATATCAACTTTATAAATTTACATGTTGGCTGTTGCTTTGAATATCACGGCCAAGTTTCATCACATTTCTGAAAGTTAAATGTC ATATTTGTCTTCCCCTTGGGTCAAAGGGTGTTTGAGCTGCTGTGTTGTACAAGTAAGACAATATGCAATAGCAAACTTACAGTGAACAAGAATGATCTAT GAAAAAAGTAAAGACCTCCCTTTCTCTGCTGACATAATATATACGGTAGGGATAAGTCAGTTTCCTTGTGTCATCCTTCAAATCACTGTAAGTCGTACTT GAGGCTAGTGATACTTAACATCATCTTTATTGTGTTAATTTATCTGGGTGATATTATACTCATTGAGTTCGTTTCTTGGTAAGCAAAAGACAAATGAAAC ATCACTCTTTTTGTTCTCTGTTTTTTGGCAGAATGAAGAGTGTCATTAATCACTTGAAAGGGAATAATGGTTTTCCGCGATTAAGAATGGGCATCGGACG GCCTCCAGGGAAAATGGATCCTGTAGCCTTTGTTCTTCGCTCTTTCACGAAACAGGAGAGGGCAGAGTTGAATTTTACATTACAACATGGATTAGAAGCC ATTCGGATTCTTTTGCTGGAAGGATTTAATAAAAGTGCAACATTTGTTAATAGTGCCAAGGAGGTATAGCAAATTGGTTAATAAGTGATTGCTGAATTTA AAGATCCTTTTGGCAAATACAAAGTGATAGCAAACAGGACCACGTTGCAAGAAAGCAGTTTCAGAATAGTGAATATTGATGTTATGGAATTACCTGTATC AGTGTATGTACTATTGACCTCGACAGAGATATGTGGGTGTAACTTTTGAAAGGAGAGGTGTGTCAGATTTAATTAAGCAAGTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_142045; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417831
| Blastp | Peptidyl-tRNA hydrolase, chloroplastic from Arabidopsis with 82.3% of identity |
|---|---|
| Blastx | Peptidyl-tRNA hydrolase, chloroplastic from Arabidopsis with 80.95% of identity |
| Eggnog | The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity)(COG0193) |
| Kegg | Link to kegg annotations (AT1G18440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446278.1) |
| Pfam | Peptidyl-tRNA hydrolase (PF01195.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |