Ll_transcript_418243

• Id Trinity: TRINITY_DN46075_c1_g8_i2
• Name Transcript: Ll_transcript_418243
• Sequence: ATCCACGAAAAGATGATTGCAGGATGAGATGATAGTAAAATGAAGTGCTTTAAGCACCACCAGTTACAACAACAGCAAAATTAATGGCCTCGCTAAGATT TTCCATTTCCCTCGATACTTTCGACTCCAAGATTCCAATTCCTTCTATTTCCTGTACCTTCAAATCTCTGCGCAAAACAAAGTACATTAAATTCAAGGGT TCGGTGGCGGAGAATCTCAACTCCAAGCCTCAGGTTCGGAGCCCGAAGAGCGAATTTTCGAAATTCCGTTACACAAAGAAGAAAAACAATGCTTCACTAG ATGCAGATAAGTTCCTTGTACACGTGGACGGTGGTGATGTCGACGTGGATTACACTTCCCTTGGGGTTCAACTGAGCGTTGAACATTGCAACGCAATCTT GAAACGACTCGATGAGAGAACCAACAATGAAGACAAAACGGTGTCGTTTTTCGAGTGGATGAGGAAAATGGGGAAGGTGGAACGCAACGCCAGTGCTTAC AACGTCGTCGTTCGCGCGTTGAGCAGGAAACAAGAATGGGAAGTTGTAGAGAAATTGATTTGGGAAATGAAGACAAAATTCGGCTCCGAATTGGGGTTTC AAGTTTTCAACACAGTTATATTCGCGTGTTGTAAAGGGAATTTTGTGCAATTAGGGGCAAAATGGTTTAGAATGATGTTGGATTGTGAAGTTAAACCTAA CGTCGCGACGTTCGGTATGTTGATGGGGCTTTACAGGAAGGGTTGGAATGTTGAAGAGGCAGAGTTTGCATTTTCTCAAATGAGGAAATTTGGGATAATG TGTGAGTCTGCATATTCAGCTATGGTAACTATTTATACCCGTTTAGGGTTGTATGAGAGAGCTGAAGGGGTCATTGATTTGACGAGAAAAGACGAAGTGG TTCCTAATTTGGAGAATTGGTTAGTGATGTTGAATGCTTATAGCCAACAAGGGAAATTGGTGGATGCCGAGAAAGTGTTGGTTTTGATGAAAGAAGCAGG GTTTGGTAACAATATTGTTGCTTTTAATACTATGATAACTGGTTATGGGAAAGCGTCTCATATGGATGCTGCTCAAAGTGTTTTTATCGATATGAGGAAT CTTGGGTTGGAACCTGATGAAACCACTTATCGGTCTATGATTGAAGGCTGGGGAAGAGCTGGTAATTATGAAGAAGTGAGGCGGTACTATAAAGAATTGA AACGGCTGGGGTACAAGCCAAATTCGTCTAACTTGTTTACACTGATAAAATTGCAGGCCAAACATGGAGATGAAGAGGGTGCTATTGGATGTCTTGAGGA TATGGAAGAGATTGGCTGCCAGTATTCTTCCATGCTTGGTATTCTTTTGAACGCGTATGAGAGTGCTGGAAAGGTTGATAGAGTGCCAATTTTGCTTCAA GGGGAATTTTATCAGCACATTCTTGTCAACCAGACTTCTTGCTCCACTCTAGTCTTGGCTTATGTAAAACATCAGTTGGTGGATGATGCCATGAAACTGT TGCATGTCAAGAAATGGCACGATCCACGTTATGAAGATCACTTGTATCATCTTTTGATTTGCTCGTGTAAAGAGGAAGGTTTGTTGGAGGATGCTGTTAA GATATACTGTCAGATGCCCAAAAATGATCACAAGCCAAATGTGCACATTGTATGCACCATGATTGACATTTACAGCATCATGGGGCTATTCATTGAAGCA GAGATGTTGTATCTGAAGTTGAAATCTTCAGGAATTTCCTTGGATATGATTGCCTATAGCATTATTGTAAGGATGTATATCAAAGCTGGATCTTTGAAAG ATGCTTGCTCTGTTTTGGATGCAATTGACAAGCGAACGGATATTGTTCCAGATAAATTTCTGTTGCTTGATATGTTGCGTATTTATCAAAGATGTAACAT GGTTAATAAATTAGCTGATCTGTACTACAGAATCTCAAAAGACAGAGTGAATTGGGACCAGGAACTATACAATTGTGCCATAAACTGCTGTGCCCATGCT CTGCCAGTCGATGAGCTTTCCAGGCTTTATGACGAGATGCTCGAGCGTGGATTTGTACCTAACACGATTACCTGTAATGTAATGCTTCATGTCTTTGGGA AAGCCAGACTCTTCAAGAAGGTGAGGAAGTTGTTCGTCATGGCTAAGAAACAAGGCCTGGTTGATGTGATCTCTTATAATACTATCATAGCTGCATATGG GAAACATAAATACTTCAAAAACATGTCATCAATGGTTCGGAAGATGCAATTTGATGGATTTTCAGTTTCCCTTGAAGCCTACAATTCAATGCTGGATGCT TATGGAAAAGACAACCAAATGGAGGCCTTTAGATCTGTATTGCAAAAGATGAAGGAATCAAATTGTGCCTCCGACCACTATACATACAACACCATGATCA ATATCTATGGAGAGCAAAGATGGATTACTGAAGTCGCTGACGTGCTTACAGAATTGAAAGAATGTGGACTTAGACCTGATTTATACAGTTATAACACATT GATCAAGGCATACGGAATTGCAGGAATGGTGGAAGGTGCTGTCGGATTGATCAAGGAAATGAGAGAAAATGGAGTAGAACCAGATAAGATAACCTACACT AATCTAATCACTGCAATGAGAAGAAATGATCAATTTTTAGAAGCTGTTAAATGGTCCTTGTGGATGAAGCAGATAAAACTCTGAATGACAACTGAATATC AGTGTAATATGTCTCCTTTAGTATGTCTCTCTCACTCACACATAAGTATAGACATGCATGCACACGCATATGCACAAAGTAGCAAATACCACTGGTCTTA AGTTTAGAAGGTACTATGACTATGATGGAGTATGTCTAGCATAGTCTTTTTGCTTAATGAGAATGAAAGAATAAAAGCCTCATATTGAAGAGGGTCTCAA TATTTCCCATGTTTGTGTAGTATGGACTGTTGAATCTGCATCTATCACATTTGTTTTTTGGGTTTTAATTATAAATATCTGTCTAGTACTTTTAGGCAAA ATATTTTGTTGATAGATGCATTTAAACATAATTCTCACATTTGAACCACGAATTGTTTTCTCGTACCGACTCATGAATTTTTTTCGAACTGATTCCCTTC CAGGAACGAACCGGATTTTTACTCACGGTTTAAATAAAAAAAGAAGAATAATTGATAATATATACTCAC
• Tissue: pods
• Gene name: LI_gene_142115;
• Additional information: details;

Expression of Ll_transcript_418243

FPKM

• PAB: 1.6
• PNAB: 7
• PS1: 7.6
• PS2: 3.8
• PS3: 6.9
• PW1: 5.1
• PW2: 5.4
• PW3: 6.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_418243

• Blastp: Pentatricopeptide repeat-containing protein At4g30825, chloroplastic from Arabidopsis with 59.01% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g30825, chloroplastic from Arabidopsis with 59.01% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G30825)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443020.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;