| Id Trinity | TRINITY_DN46079_c4_g4_i3 |
|---|---|
| Name Transcript | Ll_transcript_417779 |
| Sequence | GGACCTTAGTTTTGCGATTAAGAGTGGAAAAGTTCGTGCTCCAACTCATATTATATCCACCATTTCTGACGATAGAGGCGAGGAGCCATGCTATGCTGGT GTACCCATGTCTTCCATTATTGAAAAGGGTTATGGTGTGGGTGATATTATCTCTCTTTTGTGGTTTAAACGCAGCCTTCCCCGTTACTGCACTCAATTTA TTGAGGTAGGCTATTCAATACTGCAAAGGGCCTTTCTTGAATTTTTTTCACCCTTAGTTTCTAAGTGCATCATTAAGGACCCAATTGCAAGGTCTGAGAC TTGAGTCGCATCTTAAGTATGAGTGTTCGGTATGGAGGTCAATATGGCCTTGGGATCTCACACTACAATGGCTAGATGTTGTGATCAAGTGGTATTGTTG ACCCAAGGTTCATATTTATTGGTGTCAGAGCCTTCCACCATGTCTCAATTGCGAATGAGTAATGCAGGTTGTAACACATGCATTGCAACTTTTGCCTTGG ACTACTCAAAGTGCTAGTGCACAGCCAGCCAACATATGGGGCAGCGAATCATGGTGGACTTTTAGGGTCTGTTTTCGAATTTTTGGAGGGCTAGGAGGGA AGGGGAAGTCTTGGGAGCCATGAAATATATTTGTGAGATGGCTCTCAAGCCTTCCCTTCCCCTCCAAAAATCAACTCGTAAACATACCCTTAAGATCTGT TTGCATGGTATGGCACTTGAGTCACACATCGAAAGTATGAGATTCTGATGTGGGGTTTATGTGGCCATGGTTTTTTCCACTAAAATGGCTGGCTTTTGTG TTTGGTCTCTCAATGTTAGTATCAATGTCTCTAGAGTCTGTGAAACTGGCCTATGTTCAAATCTTTTAGAGAGTTCCCTATGTTGTCTGTGTTTATATAT TTCTTTTCTTAGCAAACTATTGTATCATCCTCTTGCCTCTATCTTGATGATACATTACATTAAATAGATTTGCGTCATGCTTTGTGCCGATCATGGTCCT TGTGTCTCTGGTGCTCACAATACTATTGTGACAGCAAGGGCTGGGAAGGACCTAGTTTCCAGTCTTGTATCAGGTTTGCTCACGATTGGTCCTCGATTTG GGGGTGCCATTGATGATGCTGCATGCTACTTCAAGGATGCCCGTGACAGGGCTCTTACACCTTATGAATTTGTTGAAAGTATGAAGAAGAAGGGCATTCG TGTGCCAGGAATCGGGCACAGGATCAAGAATAGGGACAACAAAGACAAGAGAGTTGAGCTGCTACAGAAGTTTGCACGCGCACATTTTCCTTCTGTGAAA TATATGGAATATGCAGTCGAAGTTGAAACCTACACTCTCACGAAGGCAAATAATGTAGTTCTTAACGTAGATGGTGCAATTGGGTCCCTTTTCTTGGATC TTCTTGCAGGTAGTGGAATGTTTTCCAAACAAGAGATTGACGAAATTGTGGAGATTGGCTATCTAAATGGGCTCTTTGTGTTGGCACGCTCTATTGGTCT GATTGGGCACACTTTTGACCAAAAGAGATTGAGGCAACCACTCTACCGTCACCCATGGGAGGATGTTCTCTACACAAAGTGAGAGGGTTTTGTATGGCTG GAAGAACATTATCATGCTTCAAATTAGCAACCTTTGTGGACAAATCTTGCTGAAATATGGTGGAATAATTTTTTAGTTGTTAGATTAGTGATCTCTCTCG CTTCAAACCACGAGAGAGCATAGATCAGAATCACAATAGATAACTTTGACGAAGAGTTGTTTGGACAAGGATCTGTTGTCCTAAACATTGTCCCAAAATC TGTACCAAACCAATAACAACATGTCACATCAGTCAAAAAAAATTAAATATTCATATTTTTTTTCTTTATTTTGATTGGCTCGGTGGTTAGAAATAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_142144; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417779
| Blastp | ATP-citrate synthase beta chain protein 2 from Arabidopsis with 93.03% of identity |
|---|---|
| Blastx | ATP-citrate synthase beta chain protein 1 from Arabidopsis with 92.16% of identity |
| Eggnog | Succinyl-CoA ligase ADP-forming subunit alpha(COG0074) |
| Kegg | Link to kegg annotations (AT5G49460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419112.1) |
| Pfam | Citrate synthase, C-terminal domain (PF00285.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |