Id Trinity | TRINITY_DN46085_c0_g1_i3 |
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Name Transcript | Ll_transcript_418520 |
Sequence | CGAAAATGGGAAAGGGGTAAATTTTGCATCTAGGGTTTATGCTTTATATTCAACACCATCATCAAATTCTCTTCCACAACAATTCATAAAAAAAAATTGA AAATTTCTGGTTCTTCACTGCATCTATGGCTTCCAGGGACAAGGAACAAGCTCCTCGGAACCATCACCACCATCTCTTGAGCAGCCTCGTCGTCCGCCCC GAAGTCACCTCCGTCGCCGATACCGGCGCTGATCGCGGCGGCGATTTCGAGCCCGGAGAATTCCGCCGTGATCATCGTTCCCCTTATTCCCGCTCTGATC GATATTCGGGTGATGCTGCTCTGATGATGAAGGCCTGTTGCTGTGAATTCAGTTTTGGATCATGATCTGGGGTTGTTTTTTAGTTAAAAGGGTTAATAAG TGTGTTGGATGATGGAAATAGTCCATTCTGCGTGAGAACTTGTGAGGTTTTGTACCATGAAATCTGTTCTATGGGTTCTCATTTTGCTGAGTCATGGTCA TATGTTTGATTTGGATCATTTGTGAAGACAGTGTCAAGTTTAATGGAATATGGGATAGAATCACACGGTACCACGTGACTATCACTGTGGTCACATGATT TGTCGAGGACTACGACTGACCACTGCTATTTGTTTTTGGGGAATAAACTTACACTATAACCAATGTTTGTCTGCTATATTTGGGTTCCATGGGGTATATT TGGGTTCCATGGGATATATTTAGTTTCCACCGCAAGAAGTTCTTCGTAGCTGGATGAAATGCTTCCATTACTGAAACTGATCTGACATTATGGAATGGTA ACGTTTATTGATGATAAGCTTCATATCGTTATCACTTATCTATGGTCATTTGAAATCCAGCTACACGTGTATGGTTTTCCTTTGGAATCTTAATATTTTT TGTAGCTGGTGATTGTCATTTTAGTTTCTTTGGTATTTTCTTGTTTGGGTGGTTAATAAGAGATGATTAAGCTGGTTGTTTATTTACAACATGGAAAGAT GATTCTCAGATTAGTAATTCCATGTGGAAGTTTAGGGACTTTGTTATCATGTGATTGTGTCTGCCAAATCCATAATAGCTTTCATATTGATGCATTATGT GGGGGTAACGACATGGTACAGAGAAGGGGTGCATATCTGCTAAAATTTGAGGGAGTGCACTTTGCCATGTCCAATTTCATTCTCCAACTGCTTTGGTGTT ACTTAGGGGTGGTATTGACATTGTTCTACACAACTTCAACAGGGTTTATCTGCATGGGTCATTGTTGTGAAAATTTGTGAATTATGTTGCTTTGAATCTA CCTTTGGGTGGCGCAGCATACTGGGGAGATGGTTGCAAAAACAGTCGAAGTCTCAAAGAGGTGGTTGATGGTTGCAAGATACCAAACTTTGGGATTCTTC ACTCTGTTGTGGCGTTTGTTGGTGGTTATTTCTTTGTGGTGTACTTTCTGTTCTTATGCTCCTGAATATGATCACTTTCTAAAGGGTGAAATGACATTGG TGTATTGTTTGTCATGTCGGATTAGGTTTTTCTATGGGTGTTAGCTCATACTTTTGTCGAGGTTTTGAACTTTGTTCTTATTTTATCCTGTAGTGCATAG GTCCAAAATTTGGATTTGATATTTCTGATGCTTAGGTTAAATGATATTTGTATGCTTAACTATATCATGGTCTGACATTGCATTCAGAGATTGATAGAAT TGAGATCAAGGATATAAAAGAGGTAGCTTATGTGTCACGGAAAGCCCTGCCCATAGAACCTGTTTGCTTTTTGGTAATATGGATCAGGTGTTTGTAAAGT GACATTGAAGGTGCTATCAATAAACTTCCTGCACTTTTAATTTACATATCCTTGAGGAGGAGAAGCCCTGTGTGGTAGTAACCTTCCCTTTGAAATGTCA GGGTTATATGGCAGTTGCATGATCACAAGTTTTTGGATTCTACAGTAGATTGCAATGCTAAATTTTGCCTCAAACTCTGTAAGTTGCTTATTTTCAGATT TCATTGTCTTTGTTTTCCCAGGGTATAGAATTCGCGCAGGTTCTGCATCTCCGGTACACCGTAGAGATGCAAATCACCGCTTTGGTTCTGATTATAATCA CTTATCACAAAGCCGTGGATATGGCGGCGGGAGAGATCCTGGTAGATATAGAGATCCTTCACCTCCTTATTTTCGAGGAAAAGTAGGTGGCAGACCAGTT GGTAGAGCTTTTGACAGGCCTGGCTTTGTTCCTGGGCTAGCTAGAGGAGAAGGGAACAGTAGAAACAACCCTAATGTTCGTCCAAGGGAGGGTGATTGGA TTTGTCCTGATATCCGGTGTGGTAATCTTAACTTTGCAAGGCGTGACTACTGTAACAAGTGTAATAGGTCTCGACCTGCACCCGCCGAGAGTCCCCGGAG GGCATATCCTGG BLAST |
Tissue | pods |
Gene name | LI_gene_142188; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418520
Blastp | Zinc finger Ran-binding domain-containing protein 2 from Pongo with 55% of identity |
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Blastx | - |
Eggnog | Zinc finger, RAN-binding domain containing 2(ENOG4111QXA) |
Kegg | Link to kegg annotations (100174707) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436628.1) |
Pfam | Zn-finger in Ran binding protein and others (PF00641.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |