Ll_transcript_417927

• Id Trinity: TRINITY_DN46089_c0_g2_i1
• Name Transcript: Ll_transcript_417927
• Sequence: TCTCTCTCTCTCGTTCCCTCGCTGTAAAATATAAAAATCACAAAGACAAAATATTTCGATTCCATATACAAAATTGAAGGATTTTCCCCACTTTTCCAGA ATCCCGAGGCCAAATCTACCTATAATTGTAAATATCTCATAGAGAGAGAGAGAGGGAACAGCTGTTATTGATTCTTCCTGAATCGAAGAATCTGAGAGAC CCATATCTGTAGATAGTGTTTAGAGAGATAAAGAGGAAGTGGGGTTGTATCAAGTTAGGGTTTTTGGTTTTCATTCTTTGGTGGGTCTCAAAACTGAAGA TGATGGATGTGATACTTCACATATACGATGTGACCAACAGTGGATCCGATAAGACCAACAATACCATTCTTCAGATCAATAAGATCTTCAAAGATGGAAT TGGCCTCGGTGGCATATTCCACAGTGCCGTTCAGGTTTATGGAGATGATGAATGGTCATTTGGATTCTGTGAGCAAGGTACTGGAGTTTTCAGTTGCCCA TCTGGAAAAAATCCCATGTATACATATCGGGAATCCCTTACTCTAGGAAAAACAAACCTTTCCATTTTCAAGGTAAATCAAATATTAAGAGAACTCAGTA GAGAGTGGCCTGGAAATTCATATGATCTATTGGCCAGAAACTGCAATCACTTCTGTGATGAATTATGTGAAAGGCTTGGTGTACTGAAGCTTCCAGGTAA ACACCTACCTATACTGTGTTTCTAAGGGGTGACTCGGTAATTTTTACACTATGTTAATTCTCTGGGATGCGACTTTTCACTGCTAAAGTTTCTCTGTTTG AATATTGTTTCTACCAGTATAATATGATACTTGTCTTTGTGGAAACTGGATTCCATTTAGACAGTTAAATGCTCAGCTCATCATTATGCTTTAGTCTGGG CTCTATTTAATTGACTTTATTACTAATTTTTTATGCATTTCCATAGTAAAGAAATGTGGCTTGGATTGAAACTGCCGTGGCCTTTTGAACGTAGGGAAAG GAAGTTGGGAAATAGTTAAGTTGAGTCATTAGTGTATAGGACAGGGTGAGAGATGCTTGAACATGATTTGTGAGGTAATTGGGTGGTTTTGATTCCAAAG TGCTTGTAGCCTTGTACTAAAAGGAATTGGGAGTTCTTGGGTTTTAGGGTAGATAATACAATGACTCACTTCCCATTTAAATTCTCATGACAAGTGATGG AGGTTTTTGCATCGACCAATCTCATATATTATTGCTTCCATACATTACTTCAGATTTGCCATGTATTCTTATGGCTTCCATGACAGGTTGGGTTAATAGG TTTGCCAATGCCGGCGATACTGCTATGGAAGTAGCTGGAAGTACAGCATTACGGGTGAGAAACTAATTTCTAATCCACTAACTTATGACGTTTTGTGTTA AATTTTTCCTTCACTTATCTCATCACTACGTGGTTGTTTTAATGATGTTGCTTTTCAACACTTAAGTAATAAACTATTTGGCATATTTTGACTTTTGAGG AAACCTTATAATACCTCGTTATTGCAGTTGCGGCAAGCTAAAACAGAGATTGTATCAGCAAGCAAAGTGGCATACCGGTTCCTCTTAGGTGTTACAAACA ATGTTAAAACCGATCTAGAGTCCCCTAGCAACTCAAACCGAGAAGGAGGATCCCCTAGATTTCAAGCTACTTGGTTGAAAAATATAATTACTAATGGTGC AAAACCATCAACTAGTTCAGAAGCTGTGAATCAGAATGGAGTTGTGCCTCAACCACCAATTTGAGAAGATGACAAAGTCATGTCATCTTCACATGATAGT TGAGGACTGAGTTCACTGTCCAAACCATAGTTCTTCTGATGTGTATTGTAATTTGTAAGTCAAACAAAAGGAAAGATTTGACATGTTTATTCATTGTGTA TCAAATGTAAAATTTTCATTTCTTGTTCAACTTAAATCTTTTTAGGCCCCACGTAAAACTATGCTCTTTGAAAGATATAATTGTACTATTTTCTGCCCTC TCTGAATGTGACTTGTTAACGGGCGATTGGACCAATGAATTGGGTTGGACTGCAAAGTACAATCCAGATATAGATTTAGTCATCTTTCACTATCAAAATC TCTTATTTGTCTGCTTGTACAAGTGAAACTTCATGCTTGTCTGTTTTTACACTGTTTGACTGGTTTGAGTGAGATAGCTACCAGAAACAACGTGGGTGTG ATCCAATGTACTCCCTCAATTGAAGTTCTTGGAATAAGATACTTTAGGATCTCTCAATGATGATACCATCTGTTTTCTAGTTATTTTTTAGGATGACACA AAGTCCA
• Tissue: pods
• Gene name: LI_gene_142194;
• Additional information: details;

Expression of Ll_transcript_417927

FPKM

• PAB: 1.6
• PNAB: 0.8
• PS1: 0.1
• PS2: 0.6
• PS3: 0.4
• PW1: 1.1
• PW2: 0.6
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_417927

• Blastp: DeSI-like protein At4g17486 from Arabidopsis with 32.61% of identity
• Blastx: DeSI-like protein At4g17486 from Arabidopsis with 31.91% of identity
• Eggnog: Desumoylating isopeptidase(ENOG4111H3Z)
• Kegg: Link to kegg annotations (AT4G17486)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449692.1)
• Pfam: PPPDE putative peptidase domain (PF05903.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;