Ll_transcript_417928

• Id Trinity: TRINITY_DN46089_c0_g2_i2
• Name Transcript: Ll_transcript_417928
• Sequence: CCAGAATAGGGAACTGTAATAAATATATCTGTTATAAAGAAATAAAAAAAAACCCTCTTTCTGTCCCAAGCCTACTTTCTCTCTCGTGAATTCCCTCACA AAAAAAATTTTGGATGTGAAAATTGAAGGGGTTTTTGTTTCCCCAAATTTCTTGAATCCCGAGGCCAAATCTGGCTTTCAATTCTTCAAATCTCATTAAC ACAGAGAGAAAGAGAAAAACTGTTATCGTTGAATCGAAGAATCTGAGAAACCCAGATAGGTAGATTGAGTTTAGAGAGAGAAATAAGAAGTGGGGTTGTG TCAAGTTAGGGTTTTTGGTTTTCATTATTTGTTGGGTTGTGAAAATTGAAGATGACGGATGTAATACTTCACATATATGATGTAACAAACAGTGGATCAG ATAAGACCAATAGCACCATTCTTCAGATCAACAAGATCTTCAAAGATGGAATTGGCCTTGGTGGGATTTTTCATAGTGCTGTTCAGGTTTATGGAGATGA TGAATGGTCATTTGGATTCTGTGAGCAAGGTACTGGAGTTTTCAGCTGTCCTTCTGGAAAGAATCCCATGTATACGTATCGTGAATCCCTTATTCTAGGG AAAACAAACTCTTCCATTTTCAAGGTAAATCAAATATTAAGAGAACTCAGTAGAGAGTGGCCTGGAAATTCATATGATCTATTGGCCAGAAACTGCAATC ACTTCTGTGATGAATTCTGTGAAAGGCTTGATGTACCAAAGCTTCCAGGTTGGGTTAATAGGTTTGCCAATGCTGGTGATACTGCTATGGAAGTGGCTGG AAATACGGCAGTACGGTTGCGGCAAGCCAAAACAGAGATTGTATCAGCAAGCAAAGTAGCATACCGGTTCCTTTTAGGTGTTACAAACAATGTTAAAGCT GGTCCAGAGCCTCCTAGCAATTCAAACAGTGGAGGTGGATCCCCTATATTTCAAGCTACTTGGTTGAAAAATATTATTACTACTGGTGCAAAACCATCTA CTAGTTCAGAAGCTGAGAATCAGAACGGGGTTGTGCCTCAACCACCGATCCGAGAAGATGGCAAGGCACTACTACGCCACATGTCATCTTCACATGATAG TTGAGGGAGTTCATTGTCCAAAGGCAAGTTCTGCTTTGTATTGTAATCTGTAAGTCAAACAAAAGGAAAGAAATTTTACATGTTATTCATATTGTATCAT ATGTAAAATTTTCAATTTCTTGTTCAACAACAATGTTATTTGTCCCTCGAAAGACTATGTTCATTAAAAAATATATTTGTACTATTTTCTTTCCAATCTG AATCTGATTTAGTTAAACTTACTTTGGTGAAGTTCCCCGTGATTGGACTAATGATTGGTTTCACAATTACACTGTAAAGTGCAATACTGGTAGATTTAGC CATCTTTCACTATC
• Tissue: pods
• Gene name: LI_gene_142194;
• Additional information: details;

Expression of Ll_transcript_417928

FPKM

• PAB: 64.3
• PNAB: 26
• PS1: 16.7
• PS2: 14.5
• PS3: 16.7
• PW1: 34.4
• PW2: 35.3
• PW3: 28

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_417928

• Blastp: DeSI-like protein At4g17486 from Arabidopsis with 34.27% of identity
• Blastx: DeSI-like protein At4g17486 from Arabidopsis with 34.27% of identity
• Eggnog: Desumoylating isopeptidase(ENOG4111H3Z)
• Kegg: Link to kegg annotations (AT4G17486)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453195.1)
• Pfam: PPPDE putative peptidase domain (PF05903.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;