| Id Trinity | TRINITY_DN46094_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_417993 |
| Sequence | CTCCCTCGTTTTCTATAGATCCATTATTAATAAAATGGATTACATGAATATATTGTTTTCCCCCACTGGTCCAAAACCCTGGCTGTGCGTGTGGTAAGTG TACATAAACCTCAGCAAACCATCATCATCATTTGGCACAAGAACAAGTTTCACATTTACTTCAACCCATAGCCAAAATCTCAAAAGAAAAACCCAAAAAT GTCAACACCTTCAAAGCTCACACTATATTCTAGATTACGAACTGCACTATCCCGCACCCTTTCACCTCCAACAACCTTTTCTCCCTTCTTCCACCACCAC CGCCGCCACCGCACTTTCTCTTCCGCCACCGCCGCAGCTGAAACCCTATCATCCATGGACCACCACTGCCATCCATGGCCAGAATGGGTTTCGTTCGTTG ACACTTTGAACACCGAAGGCTACATTACCAAACCCTCTTCTTCTCCTTCTCAAGATAAAAGTGTGTATGCCAACATGAATCTCTTGAAGGATCCTTGTCT CAGCTTCGCTCGTGATCGCTATGATATTTTCAAATCGCTGTCGTTGAAGGATATTGAAGGAGTTGTTGAGGGAGGATGTCCTAATCTTCTCCGAAAAGCT GTCAATTCAGCTAAAAGATTGAGAGTTCATGTGCGACTAGATGAAGGAGATGTTTGTAGTGCTTGCAATCTGCGCGACTCTTGTGATCGAGCTTATGTTA TTCTAAAGGAATTTGAAGCTGATGCTCGAACTGTGGATATAGTGCGAATACTTATGCTCTACGCATTAGATCCACTTGTTCTTTCTGAAGGAGAGAAACC ACCAGGCAGAGAGGTTATCGAATCATCTGTAAGAAAACTTCTATCTCAGATGATTGAGTTGAGTGACTCATCCCCTGCTCCAGCTCCTGCTCCTACTCGT CCAAAGCCTACCACACAAGATGCCACTGCAAAAGGACAACCTCCAAGTTTTACGGCTAATAATTTGTCTAAAGATGTTGAAATGAAGAAAGGTGACTGGA TGTGTCCAAAATGCAATTTTATGAATTTCGCCAGAAATACAGAATGCCTAAATTGTAATGAAGACAAGCCGGAGGATCTTAATGTGCATACTGTTGAAAT GAAGAAAGGAGATTGGACCTGTCCTGAATGCAGTTTTATGAATTTTTCTAGAAACACACGCTGTCTTAAATGCAGAAAAGCGGCTCCACCAAAGATGTTC AGTACAGATGAAGTTGAAAGGAAAAAAGGAGATTGGACTTGCTCGCAGTGTGGGTTCATGAATTTTGCTAGTAATGCGAAGTGTTTGCGTTGTCCTGAGC TAAGGCCGAAGACACATCCTGGGGACTGGAATTGTCCAAAGTGCGATTTCATGAATTTTTCTGGTAAACTAAAATGTTTTCGGTGTCAAGAGCCAAACCC AAGTCCCAAGAAACATCCTGGGGATTGGAGTTGTCCCAAATGTGATTTCTACAATTATTCAAGAAACATGGCTTGCCTGAAGTGCAATACCGGTCGCCCT GAAGACCAACCAACTAGTGAGTATGAGGAACATGTGTGGAGAAGATCAAGATGATTAAAAAGAACAAAAAAATTAAGGTTTTTGCATGGTGGGTCACAAT TTTGGCATCATTTTATTAGAGATAGGCATGAACAACCATTAGATATGAGCATAGTTATTTGCTCACATGAATTTTGTTTTCATATATCTTGTACACAATT GTATTAACTAAACTAATTTAATAGTTTGTTATGTAACATCATTGTTTTTATGTATATCATTAGATTACTATGGTGAATGTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_142214; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417993
| Blastp | Zinc finger protein VAR3, chloroplastic from Arabidopsis with 30.42% of identity |
|---|---|
| Blastx | Zinc finger protein VAR3, chloroplastic from Arabidopsis with 30.91% of identity |
| Eggnog | zinc finger(ENOG410YNCK) |
| Kegg | Link to kegg annotations (AT5G17790) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430472.1) |
| Pfam | Zn-finger in Ran binding protein and others (PF00641.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |