Ll_transcript_418127

• Id Trinity: TRINITY_DN46095_c1_g1_i7
• Name Transcript: Ll_transcript_418127
• Sequence: GGGAAAGGAAAAAGAAAAAACATCACCCAAAATGATATCTTAACCAGTGACTAACCATGGTTGAAAATAGAAACCCCCGAATTTGTGCGTGTGGGTGTCA CTGTTAGTGCTTTCTGCATTGGTTCTCTGCAAAACTCTGCAAATCTTTCGCCGCCTTCTTCGTCCATTTCGGTCCTTCCCCACTTCTCTCAAATTTTGGG TCTTTTTACCTTTCTCCAAAGTTCCTTTTTTTCATACTAACTTCCACTGTTTTGTTGCAAATCATCATTCCCACTCAAACACTGTTATAGCATTTTAATT AGCGAAAACTTTGTCGGTCAAAGCAACCCAACTCAGGTTTTCTCGAAATTTTGTACCTTTTTGAATGCCCAGTTAAGGAAATTACCATCTTTGAGTAAAA ATTGGAGTTACACGAGCTTTCCCTTGATCTCAGCCAAAAATCAGTGTCACTATTGTCGATGGATATTCAACTTGTTGTGTGTTTTTATTTGGATTCCAAA GGGGTTTCCCAATAACAGGGGTATGCTGGTGGAAGTAACAGTAAGGAGCTAAAAAGTGCACAAGTTTGAAGAGTTTTGGAGATTTTTTGTTCCATTAATT GGTTGATTCATCAACCATCATGCCTCTTTATGAGTTATACCGGCTTTCTAGAGAGAAGCTTGATAAAGAGGTTAGCAACACATGTGCAGCTGAACAATCT CAATCTTCCTTGCCTGAGAATGATTTCTTTGAGCTGGTTTGGGAAAATGGTCAGATTTCAACACAGGGTCAGTCCAGAAAGAGCCCTTCTTCTGGCAAGA GTTTGCCATCTCACTGTGTACCGTCTCATAGTCCGAAAGGCCGAGATAAAGATGAAGGAGGATATGCTATGAATACAAGGATGGGAAAGTTTGTGGATTT TGATTCTGGATTGAATGAAATCTCAATGCCAGTCCCATCACATGAAGTGGATTTGAGTCAAGATGGAGATATGATGCATTGGTTGGATTACACAATGGAT GGATCTTTGCAAAATGACTATAGTTCTGATTTCTTACATGAACTATCCGGTGTCACAGAAAATGACCTCCCGAAATCAAATAATTTTGCCCTTGTGGATA GAAGAAGCAATGGTACTAATCAGGTATTTAGGGACTCTCGTAAAAGTTCTGCAAGTTATGTTCCTGGTTTAGAACAAGGGAATGTTTGTAAAGGTTCTTC AACCGAAGAAGTTGACACTTCTGGGCCTAAAGCTAGTATCAATCAGCTATACCCGCCATCATCACATCAATGTCAAACACCATTTGCATCTGTTAGATCC AAAGTATCAGATATAACTGAGAATAATATTAATAATGCTACTCAAAATGCACCTCATCATGGCGAAATAACTCAGATTGCCTCTTCCTCTAGTGATTTTT GTAGCTTAAAGATGCAGAAGCAGGAAACAGCTATTCCTAATAATGGTTCCACCGTAATGAATTTCTCCCATTTTGCAAGGCCTGCTGGTATTATGAGAAC TAATCTTCAGAATGTTGGCTTCAAGTCTGATTTATCTTCAGGAAAATCAGACAGTCGGGGAAATAAGAATAAAGGTGTAGCTACAACTAGCAGCTACCGT TCTGAATCAATAAGAGTTGATTCAAGTGGTGATTGTTCAAAGGAACCAACCATGCACTGCCAGCAGGTTGTGGAACAATCTAAGGCTGATTTGAAACAGT TGGAGCCAAAATCTCTTGAACAGGAGGCTGCCGTAGTTTCTAAACAGTTGGACCCAGTTTGCAAAGAGAGTTCTATTAAGGTTGACAAAACTTCCATTCA AATTCTTGCTGAAACTGGCTCTAAAAAACAAACTGCTTTTGAAAAAAGTATGGAGCCAGCAGTAGCCTCCTCCTCCGTTTGTTCTGGCAATGGTGCAGAC AGAGTTTCAGATGAGCCAAATCAAAATTTGAAGCGGAAGAGTAGAGACACTGAGGGCTCTGAGAGCCATAGTGAAGATGCTGAGGAAGAATCTGTGGGTC TTAAAAAGGCGGCTGCTGGACGAGGAGGTACAGGTATTAAGAGAAGCCGTGCAGCTGAAGTGCATAATCTTTCCGAAAGGAGGCGAAGAGACAGGATCAA TGAGAAGATGCGTGCATTACAAGAACTCATACCAAATTGCAACAAGGTTGATAAAGCTTCAATGCTGGATGAGGCAATTGAGTATCTTAAAACACTTCAG CTCCAAGTTCAAATGATGTCAATGGGAGCTGGTTTATATATGCATCCAATGATGATACCTGCGGGAATGCAGCACATGCATGCACCACATATGGCTCCAT TTTCACCTATGGGTGTTGGCATGCAAATGGGGATGGGTATGGGTTATGGGATGGGTATGCCTGACATGAATGGTGGTTCTTCTAGATTCCCAATGATTCA CATGCCCCAAATGCAAGGAAATCATTTACCTGTTGCACATGTGTCTGGACTCAACGCTTTACATGGGATGGCAAGATCAAATCCTCAAGGGTTTGGGCTT CCAGTTCAGGGTCAGGGACTTCCCATGCCGATACCACGTACTCCTGTTTTTCCTTTTTCAGTAGGGCCTTTTATGAACTCATCCACTTCGGTACAACATG CCGGTGGAACAGTAGCAGGACTTGCTGAAACTGGGAACTCAGCTTCTTGCTTGAAAGACCCAATGCCAAATGTGGACCAACAAGTTAAGCAAAGTAATGA CTCAACAAGTCAGATGATGCTTCAACCTAACCAGGTTTGTTTACTGACAGATTTCTTGAATTACTGTTTTGTTACAACAATTGTAGAGGGATTTACCTTG ATATGGTATTCAGTTGTATATGATAACTGCAAATATCGTAATATAATGCGGAATGGTCTGCTTCATCTTATAACTCATTTGCCCTACAGAGTTAGAAAGT GAAAGTCTATTGCTCTCCATTTCCGCCCCTGTGGAATGTGTTATCGGTAATTCTATTTCTAGGCTACCTAAAATAAACATTCTGAGTTACTTAATTATCC TAGTCATTTAACTAATATTACCTCTAAAATTACCATGGAGTGGTTATTTCATCTTTTATCATAAATGACGGTAGTGCTAACAAGTTCCCTAAGGGCGTTG ATTAAGGAGCACAAAAAAGGAAATTAGCATTGGAAAAATAAGTCCAACACTTATTGATGTGTTAAAACATACAAAATTTACTTTCTCTCTTGCTTAAACA GTGCCTTTCGGGGGCACTTGTTAACACCCCCCCATAAATATTAGTCCACCCTGGTCCCATCACCAATATTCAGATTAGTTTGTTTCCATGGTCACTTTTT ACAAGTAATACGCCTGATATTTCTGTTCTCCTTTTTTATATGATAGTGTGAAGCAGCAACCGTTGGATTTGAACAGTCAGCTTTGGTGCAAAATAGTGAC CATGCCTCTGATATTAATGACAGTGGAGCTGTTAATGCAAAGAACATAGCCTCATGATTGGTACACACACAACCATATTCAATATGATGTTTTACATTGA TATTTTAAGCTAAGGAGTTCATAATGGAACGCCTTACTGTTCAGTTATACGTGCAGGTTATGATTGATATTCGGCATTGACTGTGGCTAGTAGAAGAATC CATTTTTCTGAAAAGTGAGTTCAAAATCTCTTGTTTCTCATTTTGCAAGCTGAATGTAGATTATCAGAGGATATTTCAGATTATGTCGACTTGTCACAAC AAACATTAGAATCTTAAATTCCAGACTTACAATACTACACAAATTTTGGTATCTTGGGAGACATCACTCATTTGTATATCCACTTAGCTAGCTGTTCAAT CAACTGTCATAAATTTTTTATATACTACATATATGTATTCAAATGTTTGATTCAGATCTTTCATAGTGATTCTTTCGATTAATGCAATAATAGTTGTTTC TTTGCAATCTAGTTTCCTCTCAATGTCGTGACAAATACTTGAACACTAAGATGCAGATGAATGTTGAAGTAT
• Tissue: pods
• Gene name: LI_gene_142218;
• Additional information: details;

Expression of Ll_transcript_418127

FPKM

• PAB: 0.2
• PNAB: 0.5
• PS1: 0.2
• PS2: 0
• PS3: 0.5
• PW1: 0.6
• PW2: 0.5
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_418127

• Blastp: Transcription factor PIF3 from Arabidopsis with 34.11% of identity
• Blastx: Transcription factor PIF3 from Arabidopsis with 33.98% of identity
• Eggnog: Transcription factor(ENOG4111SYS)
• Kegg: Link to kegg annotations (AT1G09530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441239.1)
• Pfam: Helix-loop-helix DNA-binding domain (PF00010.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;