| Id Trinity | TRINITY_DN46097_c2_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_418730 |
| Sequence | CTTTCTTCTCTTTTCATTTCATTCATTAGCAACCTTGGGCTCTTCCAAGGTAGCCATTTTATTCAAAAAATGCAGGCCTTAGGCTGCTCTCTGGTTTTTC TCTTATTCCTCATCTTATCATTCTCATCTTTTTCCTGTGCACTTTCTGATGTTGAAGCTTCATTCATTGCTCGTCGCCAATTGTTACACCTTCATGAGAA TGAAGAATTAACCGAATCCTATGTAGAAAACTACGAAACGGATCTAAAATTCGATAACCCAAGGCTCAAACGTGCATACATTGCATTTGAGGCATGGAAA AAAGCGATATATTCTGACCCATCAAACATTACATCTGATTGGGTGGGACCAGATGTTTGCTCATACAAAGGAGTTTTCTGTGCACCTGCTCTTGATGATC CTAAGATCGAAGTTGTGGCCGGAATTGATCTTAACCATGCAGACATTGCTGGTTACATTCCTCCCGAGTTTGGTTTGTTAACTGATCTTGCTCTTTTCCA TATTAACTCAAATAGGTTCTGTGGTGTTCTCCCAAAGAGCTTTTGCAATCTAAAACTTATGCATGAGCTTGATATCAGTAACAACCGCTTCGTTGGTCCA TTCCCTCAATCTGTTCTTTGCCTTCAAGATATCAAATATCTTGACCTAAGGTTCAATGACTTCGAAGGGGAACTACCATCTGAGCTATTCAACAAGACAC TTGACGCTATCTTTTTGAACAGCAACAGATTTGTGTCCATGATTCCAGAGAACTTAGGGAACTCACCAGCTTCAGTTATTGTTTTGGCCAATAACCATTT CAATGGTTGTCTTCCTGGAAGCATTGGTCAAATGGACAAGACCTTGAATGAGTTTGTGTTGGTTAATAACAACCTCTCAGGGTGCTTGCCTTCTGAAATT GGAAAACTTTCCAGCATTGAGGTGTTTGATGTGAGCCATAACATGTTTGTTGGTGTTTTGCCAAAGACATTAAATGGACTCGGAAAGGTGGAAGAATTAT CCATTGCAAATAACAAGCTCACAGGTTCTGTCCTACATGGCATCTGTAGCTTGCCTAGCTTGGTGAACTTCACATTCTCTAATAACTATTTCAATGGCGA GGAAGAAGGTTGTGTGCCTCGATCTAGAAAGGAAATTGAGTTGAATGATGAGAAGAATTGCATTCCTGATAGGCCAAAACAGAGGGATGCAAGTGAATGC AATGTTGTCATAAGCAAACCTGTTGATTGCAACCAAGCTCAGTGTAGCCACTCTTCAACCCCATCTCACTCTAATAATCCCCCAAGTCAGACTCCATCAG AACCAAAACCTACCCCTTCAACTTCCAATCCACCAACAGAAACTCCATCGGAACCAGAATCATCACCACAGACTCCCGAAACCCCCAAAACACAAGCACC ACCCACACCAGAAGCACCAAAAGCACAACCACCTCCCACACCAGAAACACCCAAGCCAAAACCACCACCAACTCCCAAAGCAGAGCCACCACCCAAACCA CAAACACCCAAGCCAGAACCACCACCAACCCCCAAATCAGAACCACCACCAACCCCCGAAGTAGAGCCACCACAAGCACCTAAACTACAACCACCGCCTA CACCAGAAACACCTACGTTGTCCCCACCTGAGGAGGATCCTCATCGCGAAGCACCCCGAGGACGACTAAGGACTCCACCACCACCAGTCCAGTCTCCTCC TCCACCAACTAACTCTCCACCTCCACCGGTCCATTCTCCACCACCACCTGTCCACTCACCACCACCACCGGTTCATTCTCCACCTCCACCAATTAACTCA CCACCACCACCGGTCCATTCTCCACCTCCACCGGTCCATTCTCCACCACCACCGGTCCATTCACCACCACCACCTGTCCATTCCCCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_142236; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418730
| Blastp | Pollen-specific leucine-rich repeat extensin-like protein 1 from Arabidopsis with 50.7% of identity |
|---|---|
| Blastx | Pollen-specific leucine-rich repeat extensin-like protein 1 from Arabidopsis with 62.57% of identity |
| Eggnog | leucine-rich repeat extensin-like protein(ENOG410Y973) |
| Kegg | Link to kegg annotations (AT3G19020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414653.1) |
| Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |