| Id Trinity | TRINITY_DN46098_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_418210 |
| Sequence | GGGAATCTCTTGGGAAGTCATTTCTGTCTGCTTGCATCTCCTTTTGCCTTTTTAAACACTTAGCATCCTCTTCCAAGTGAAACTAAAAATAATAATGTTT TATCAATACTCACTTGGGAAACACATCATGTCTTCTCACTTCTCCACTCACTACCACTTCCCTTCTTTATTCTCTTCTTCTAACCATCTCTCTTTTCCTC CTCCTCCTTCTCCTTCTTTCTTTCTTCCTTCCTTCTCCTCCTCCAAATCCTCTATAGGTGCTTTGTCGTCCGAGACTAAGCACAAACAAGTATTCAGATG GAGAGCTATATCCAAATCACAAACTCGAGAATACCCAGACCTATTAGAGGGTGGTCTAGCAACGTTAAAGTTGCATGAGATTGATGTGGAGGATGAGAAA GATGAGGAGCGAGACCTTAATGAGGTTCTTTAAGATTAATGTTTTTTATTTTATTTCTCTGACTTTCCTTATTTTATGTTAAACTCACATCACTTTTTAG TTTTTATTCTCACCATTTTTACACATTATATAGTAATAATTGGTGAAGAGACTTTTTCTTTCTTGGGAAACACAGTGATGAATAATTATAAAATGTATAA AAAGTAGGCATGAGTGATGTGAGTAATAAATAGTATTGTTACTCTCTCTTAATTAAACCCTTTCTATTGTTTTGGTATATGACATTTCGATTTGGTTAAA GAAGGTTTGGAATGAGATAAAGAAAAGAGTGGAAGCAATCAAAAGCATATTGGGTTCCATGGAAGATGGGGAGATAACCGTATCTGCATATGACACAGCA TGGGTTGCTCTTGTAGAAGATGTTAATGGAAGTGGTGCCCCTCAATTTCCTTCAACTCTAGAATGGATAGCCAAAAATCAAATCCCTGATGGTTCATGGG GTGATAGTGAAATATTTATAGCACATGATCGTATTCTTAACACGTTGGCTTGTGTTGTTGCATTAAGGTCATGGAATTTGCACCCCGAGAAGTGTGAGAA AGGAATGAATTTTTTTAAAGAAAACCTTAGCAAGATTCAAAATGAGAATGAGGAGCATATGCCAGTTGGGTTTGAAGTTGCTTTTCCTTCACTACTTGAT ATAGCTCGAAGTTTGAACATTGAAGTACCACATGATTCTCCTATCTTGAACCACATTCTTGAAAAGAGAAATGCTAAACTCGCAAGAATACCAAGAGAGA TGATGCATAAAGTGCCCACAACTCTGCTACATAGCTTGGAGGGTATGTCAAACCTGGACTGGAAACAACTTCTAAAACTGCAGTGTGAAGATGGGTCATT CTTGTTTTCTCCATCATCCACTGCCTTTGCTCTAATCAACACTAAAGATCAAAAATGCCTCAAATATTTAAATAAAGCGGTCAACAAGTTCAATGGAGGA GGTAAAGGGCCACTTGCCCATACACACCACTCAATCTTTCCTCCTTTTTCAACTTTCAATATCTTCAAATATTCCCTCTACTTTATATATTTTACTTATA CACTACTCAAAAAAATCAAATTACTCTTACAAAATAAAAATATTTAACTTAGTCATATTTTTTTTCCAATTATTGGTTAAACTGATTTTTTTACAATAAA TTTGAGAGATATTTAATCCATTTCGAGAACCAACTTAATTAGTATTTGAGATTTTTGATGATTAAATTGGTTCTTTTTATTGTTTGGATATTAAATATGC TTATTTGTATTTTTTAGAATCCAATTTTGATATTTATTCTTACATAAGATAAAATATCTCCTGGTACAAGAAGATAAATTATCTGCTCTTACTAGTAAAA TCATATTTTTATTGATCTGATGAGATAACGAGGAGATATGTTATTCATATATCTATTAATTGGCTTATGACTGTGGATGTCTATATACAGTTCCAAACGT ATACCCAGTAGATTTGTTTGAACATATTTGGGTGGTTGATCGGCTAGATCGTCTTGGAATATCAAGATATTTTCAACAAGAGATCAAAGACTGTATGAAT TATGTTTACAGATACTGGAGTGAAAAGGGAATTTGCTGGGCAAGAAATACAAATGTTGAAGATATTGATGACACAGCAATGGGATTCAGATTACTAAGAT TACATGGGCACCAAGTGTCAGCAAATGTGTTTAAGCACTTTGAAAGAAATGGAGAATTCTTCTGCTTTGGTGGGCAGAGCACGCAAGCAGTGACAGGAAT GTATAATGTGTACAGAGCTAGTGAAGTAATGTTCCCAGGGGAGGAGATTCTTGAACATGCAAAGCAATTCTCAGCCAAGTTTTTGAGGGAGAAGCAATCA GCAAATGAGCTACTAGATAAGTGGATTATCATGAAAGACTTGCCTCAAGAGGTGGCGTATGCATTGGACGTGCCATGGTATGCAAATTTGCCTCGAGTGG AGACAAGATTCTACATTGATCAATATGGCGGTGAGAATGACGTATGGATTGGCAAAACTCTTTATAGGATGCCCTATGTTAACAGCAAAAATTATCTGGA GCTTGCTAAACTAGATTACAACAATTGTCAAGCGCTGCATCTAACAGAGTGGGGCAGAATTCAAGAGTGGTACACAGAATCAAGATTGGGAGAGTTTGGA TTAAGCAGAAAAAGGCTTCTGTTGGCTTATTTTCTTGCAGCAGCAAATATATTTGAGCCTGAAAGGTCTCATGAGAGACTTGCATGGGCCAAAACTGCAG CCTTGCTTGAAACAATCACAATCTATCTTAGTGATGCAGAAATGAGGAATGCTTTTGTCATCAACTTCACTGACCTCATCAATGTGCAACAACATTCCAC TACCTGGAGGAACAAAACAGGACATGCACTTGCTCAAACTTTGGTTTCTGTCATTGATCAAATCTCATGGGATATACTTGTCTCTCATGGTCTTCAGATT CGATATGATATGCATCACACTTGGAAAAAGTGGCTTTCAAGTTGGCAAAGTGAAGTAGACAAATGTGAAGGAGAAGCAGAGCTTTTAGTGCAGATAATAA ACCTTTGCAGTGGACATTTCATTTCTAAGGAGCTACTGTTCCATCCCCAATACCAGCGTCTTCTACAACTCACTAACACAATCTGCCATAGACTCCATTG TTACCAGAAGGACAAGGAACTTGAGAATGGCAGCTATGCCAGGAGCATATATAACATCACTACACCAGAAATAGAGTCAGAGATGCAAGAGCTTGTCCAA TTGGTGTTCCAAAACTCTCCATCTGGCATTGATTTCAATATCAAGAAGACGTTCCTCACTGTGGCTAAGAATTTTTACTATGCAGCTTTCTTTGATTCAA GGACCGTCGACTTCCATATTGCCAAAGTTCTCTTTGATAAAGTTGCATAATAATCAAATTCAGTGTTTGCAACATTTCACCATCACTGTGTAATTGTCAT CTATGTAAATTATAATATCAACTGTTATGTTTCAATAAATATAATGTTAGGAGTTTAAATTAAAGTGTATGTGAGATAAGTACCGTTGGGTATTCCAAGT GTGAGTGAAGAAGTCACACATTGTCCAAATATGGATGAGTTAAAGAGCATATAAGTGGATAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_142243; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418210
| Blastp | Ent-copalyl diphosphate synthase, chloroplastic from Pisum with 70.7% of identity |
|---|---|
| Blastx | Ent-copalyl diphosphate synthase, chloroplastic from Pisum with 71.98% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426487.1) |
| Pfam | Terpene synthase, N-terminal domain (PF01397.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |