| Id Trinity | TRINITY_DN46098_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_418188 |
| Sequence | GGGAATCTCTTGGGAAGTCATTTCTGTCTGCTTGCATCTCCTTTTGCCTTTTTAAACACTTAGCATCCTCTTCCAAGTGAAACTAAAAATAATAATGTTT TATCAATACTCACTTGGGAAACACATCATGTCTTCTCACTTCTCCACTCACTACCACTTCCCTTCTTTATTCTCTTCTTCTAACCATCTCTCTTTTCCTC CTCCTCCTTCTCCTTCTTTCTTTCTTCCTTCCTTCTCCTCCTCCAAATCCTCTATAGGTGCTTTGTCGTCCGAGACTAAGCACAAACAAGTATTCAGATG GAGAGCTATATCCAAATCACAAACTCGAGAATACCCAGACCTATTAGAGGGTGGTCTAGCAACGTTAAAGTTGCATGAGATTGATGTGGAGGATGAGAAA GATGAGGAGCGAGACCTTAATGAGGTTTGGAATGAGATAAAGAAAAGAGTGGAAGCAATCAAAAGCATATTGGGTTCCATGGAAGATGGGGAGATAACCG TATCTGCATATGACACAGCATGGGTTGCTCTTGTAGAAGATGTTAATGGAAGTGGTGCCCCTCAATTTCCTTCAACTCTAGAATGGATAGCCAAAAATCA AATCCCTGATGGTTCATGGGGTGATAGTGAAATATTTATAGCACATGATCGTATTCTTAACACGTTGGCTTGTGTTGTTGCATTAAGGTCATGGAATTTG CACCCCGAGAAGTGTGAGAAAGGAATGAATTTTTTTAAAGAAAACCTTAGCAAGATTCAAAATGAGAATGAGGAGCATATGCCAGTTGGGTTTGAAGTTG CTTTTCCTTCACTACTTGATATAGCTCGAAGTTTGAACATTGAAGTACCACATGATTCTCCTATCTTGAACCACATTCTTGAAAAGAGAAATGCTAAACT CGCAAGGTATACACATTTTTTTATTCACAATCTTACTTTTTCTGCTAATAATTGTGCTGTCTTAATATAGTTTCTTTGGCTCAGAGGTTATGCTCTGCCC ATATCTATTTTGGTAATATAATCAAAGCAATCTTATGACATCAATACTTTGCATGTAAAAGTATTTGAAGTATCGAAATATGAATTTGTAGAAATGTATG TGATTATTATTAATTGTGTTGTGTGTGGGACATGGGGATAGAATACCAAGAGAGATGATGCATAAAGTGCCCACAACTCTGCTACATAGCTTGGAGGGTA TGTCAAACCTGGACTGGAAACAACTTCTAAAACTGCAGTGTGAAGATGGGTCATTCTTGTTTTCTCCATCATCCACTGCCTTTGCTCTAATCAACACTAA AGATCAAAAATGCCTCAAATATTTAAATAAAGCGGTCAACAAGTTCAATGGAGGAGGTAAAGGGCCACTTGCCCATACACACCACTCAATCTTTCCTCCT TTTTCAACTTTCAATATCTTCAAATATTCCCTCTACTTTATATATTTTACTTATACACTACTCAAAAAAATCAAATTACTCTTACAAAATAAAAATATTT AACTTAGTCATATTTTTTTTCCAATTATTGGTTAAACTGATTTTTTTACAATAAATTTGAGAGATATTTAATCCATTTCGAGAACCAACTTAATTAGTAT TTGAGATTTTTGATGATTAAATTGGTTCTTTTTATTGTTTGGATATTAAATATGCTTATTTGTATTTTTTAGAATCCAATTTTGATATTTATTCTTACAT AAGATAAAATATCTCCTGGTACAAGAAGATAAATTATCTGCTCTTACTAGTAAAATCATATTTTTATTGATCTGATGAGATAACGAGGAGATATGTTATT CATATATCTATTAATTGGCTTATGACTGTGGATGTCTATATACAGTTCCAAACGTATACCCAGTAGATTTGTTTGAACATATTTGGGTGGTTGATCGGCT AGATCGTCTTGGAATATCAAGATATTTTCAACAAGAGATCAAAGACTGTATGAATTATGTTTACAGATACTGGAGTGAAAAGGGAATTTGCTGGGCAAGA AATACAAATGTTGAAGATATTGATGACACAGCAATGGGATTCAGATTACTAAGATTACATGGGCACCAAGTGTCAGCAAATGTGTTTAAGCACTTTGAAA GAAATGGAGAATTCTTCTGCTTTGGTGGGCAGAGCACGCAAGCAGTGACAGGAATGTATAATGTGTACAGAGCTAGTGAAGTAATGTTCCCAGGGGAGGA GATTCTTGAACATGCAAAGCAATTCTCAGCCAAGTTTTTGAGGGAGAAGCAATCAGCAAATGAGCTACTAGATAAGTGGATTATCATGAAAGACTTGCCT CAAGAGGTGGCGTATGCATTGGACGTGCCATGGTATGCAAATTTGCCTCGAGTGGAGACAAGATTCTACATTGATCAATATGGCGGTGAGAATGACGTAT GGATTGGCAAAACTCTTTATAGGATGCCCTATGTTAACAGCAAAAATTATCTGGAGCTTGCTAAACTAGATTACAACAATTGTCAAGCGCTGCATCTAAC AGAGTGGGGCAGAATTCAAGAGTGGTACACAGAATCAAGATTGGGAGAGTTTGGATTAAGCAGAAAAAGGCTTCTGTTGGCTTATTTTCTTGCAGCAGCA AATATATTTGAGCCTGAAAGGTCTCATGAGAGACTTGCATGGGCCAAAACTGCAGCCTTGCTTGAAACAATCACAATCTATCTTAGTGATGCAGAAATGA GGAATGCTTTTGTCATCAACTTCACTGACCTCATCAATGTGCAACAACATTCCACTACCTGGAGGAACAAAACAGGACATGCACTTGCTCAAACTTTGGT TTCTGTCATTGATCAAATCTCATGGGATATACTTGTCTCTCATGGTCTTCAGATTCGATATGATATGCATCACACTCATAATTGAGTGGTATCTCTGGCA GCTTTACATTTCTCATAAACAATGATTTTGAAGTAATGGTAGCTGTGAACTGGTCCAGTGAAAAGGACATGAGGATTTTGAATGAGTGGACCAATACCAG TGATACAAGTGGGCAACCACCAAACCAAAGTACCAGTGGTTCCAATATCTTCAGTATTATTGAGTTATTTACTTTCTGCTTTTTACTGTAGTGGAAAAAG TGGCTTTCAAGTTGGCAAAGTGAAGTAGACAAATGTGAAGGAGAAGCAGAGCTTTTAGTGCAGATAATAAACCTTTGCAGTGGACATTTCATTTCTAAGG AGCTACTGTTCCATCCCCAATACCAGCGTCTTCTACAACTCACTAACACAATCTGCCATAGACTCCATTGTTACCAGAAGGACAAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_142243; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_418188
| Blastp | Ent-copalyl diphosphate synthase, chloroplastic from Pisum with 58.03% of identity |
|---|---|
| Blastx | Ent-copalyl diphosphate synthase, chloroplastic from Pisum with 73.49% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426486.1) |
| Pfam | Prenyltransferase and squalene oxidase repeat (PF00432.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |