Id Trinity | TRINITY_DN46100_c3_g1_i2 |
---|---|
Name Transcript | Ll_transcript_281280 |
Sequence | CGACACCATAACGAACAACAATATAAATTCAGTTCCAAACTTTTCTGCTTCACCCTCCTCCATTTTGTAATAACCTCTTTCTCTCTCTTTCCACCGTTAT CTTCTTCTTTTGCGGCGCTGCTCAAGTTACCACCGCCGGCGTCGGCGCCGCCGCCTGATACTTTTCAGATCTATGCATATTGTTTCAAATAGCAACTGCA TGAATCTGAAGCTGAAACAATTGTTCAATAAACTCGCGATCTGAATCGTTTCTGTTATAGTGCGTAGTTTAGTTAACTACGTTGATTCTTCAAGCTCTGT TTCAAATTTGAGCTCGTGATACTTGCTATTTTTAGCTCTGAACTTGAAATTAGAAAGTGAAGTTTTTAGTGATTTGAAGATTTTGAAGTAGAAGGAGGTT CGTGACAATGGCGCGATTTAGATCGAAAATTAGGGTTGGAATCTTGATTACTGTTGTCGTTGGAGTTTGTCTTGCTGCTTTGTATGGTTTATTGCAGCCT ATATCGAATGGATGTATCATGACCTACATGTATCCCACGTATATTCCTATTTCATCGTCGGAAAGTGTTTCTCCGGCGAAGTATGGCTTGTACTTGTATC ATGAGGGCTGGAAGAAGATAGATGTTAAGGATCACCTGAAGAAGCTTAGTGGTGTGCCTGTGCTTTTCATCCCGGGAAATGGTGGTAGCTACAAACAGGT GCGGTCTTTGGCAGCAGAATCTGATAGGGCATATCAGAGTGGCCCCCTTGACCGTACATTTTATCAAGAAGCTTCCCTAAGTCCTGAAGAAGGAGGTGCA TATACAGATTTATCTGGTTTCCAATTACCCAACAAGTATACTAGAAGGCTGGACTGGTTTGCTGTTGATCTTGAAGGTGAACATTCTGCAATGGATGGTG CCATTCTTGAAGAACACACTGAATATGTTGTATATGCTATACACAAGATTTTGGACCAATATAAAGTGTCTTATGATGCTCGTACTAGTGAAGGTGTCGC AGTTTCTGGGAGTTTGCCAAAAAGCGTGATATTAGTTGGTCACTCTATGGGTGGTTTTGTCGCTAGAGCTGCTGTTATCCACCCCCGTCTTAAGAAATCA GCAGTTGAAACTGTTCTTACACTCTCAACCCCACATCAATCACCTCCTGTGGCATTGCAGCCCTCCTTGGGTCATTACTTTGCACATGTAAATTCAAAGT GGAGAGAGGGATATAAGTTTCAGGCCAACACAGGACGTCATGTGTCTGATCCTGTACTTTCCCATGTTGTCGTTGTATCTATTTCTGGTGCATATAACGA TTACCAGGTTCGGTCAAAATTAGCATCACTGGATAATATTGTGCCCCCAACACATGGCTTCATGATAAGCAGTACAGCCATGACAAATGTGTGGTTGTCA ATGGAGCATCAGGCTATATTATGGTGCAATCAATTGGTCGTCCAAGTATCACACACACTTCTTAGTTTGGTAGACTCCAGAACTGGCCAACCTTTTCCTG AAACTCAAAAGAGACTTTCAGTATTCTCAAGAATGCTGCGTAGTGGAATATCCCATAATTTTCACTCAATGATGCAGTTGGCCTCTTCTAAACGACAGTC AATAAACATTCCTGTCGGCAATACAAAAGATGCAACTGGGTTTCAACTTGAAGTGCATAATGCGTGTCCGCCCAATATTCAATGGAATGATGAGGGCCTT GATAGAGACCTATACATTGAGACTAATGTGGTGACTGTTTTAGCAATGGATGGTCGAAGGAGGTGGTTGGACATACAAAAACTGGGATCCAATGGAAGAA GTCATTTTGTGTTTGTGACCAACCTTGAGCCATGTTCTGGAATTAGACTTCATTTGTGGCCCAAAAAGAGGAACTCTGCTTCAAGTTTGCCTTCCAATGT TAGGGTTACTGAAGTAACATCAAAGATGATGCACATTCCCTCAGGTCCTGCACCACGCCAGCCTGAACCTGGCAGTCAGACCGAGCAAGCTCCTCCATCT GCAGTATTTTGGTTGGGACCTGAAGATATGTTAGGCTTCAGTTTTCTTACTATCTCGGTTGCGCCTCGTCCGACTGTTTCAGGAAGACCACCACCAGCAG CATCCATGGCGGTTGGGCAGTTCTTTAACCCACATGAAGGGAATCAAGATTTATCTCCATGGTTTATGCTTCAGTCTACCTATTCTCAGAAGGAGTTGTC ATTGGAGGAAGCTCATCCTTTGGCTGTCAAATTATCCTTTGCCATCAGCTTGGGTCTCCTTCCTGTTACCTTTTCTTTGAAAACTGTCAGCTGTGGAATT AGAAACTCTGGACTTCCAGAAGAGGAAGCTGGAGACATTGAAAGTAGTAGTAAGAAATTTATTTTTGTCATGAGGTTACTGTTTCTGTGCTTGTTTTTTC TGAAGTTATATGATATATTGATTGCAAACACATTTTTGTAGCCAGTGAGATATGTTTTGCCAAAAAAATTGGTTATAATGTTAGAAGTTAGAATTGAAGC ACATATTAAACATTTGGCTAGCTGCTCAATATGCTGATGACTAAAATTGTAATAAGCTCTTAATTAATTAGACATTGGAAATTTAGGATCATAGGAATTG TTTATGTTCTAATTTATGTAAATGTAAATATAAGATGTATTTATTCTTTGATGCATATAAGTATAGTCAACTGAGTGCAACTACACAATTTTTGTCATAT CCTTGCTTAGTTCTATATGTTTCCATAGGCTCATGATCCCTCACATCATTGTGCATGATAATTGTTTCTGGTGCTCCTTGAACAAACAGCCATGCCTCTC ATAGCTGCAGTTTTTAGGTAGTGTTTGGCATGCAAATAGGATGGAACAGAACAGGACATACATGTCTTGCATACCGTGTTTGGAGAAACTCGATAGGACA GGACACTCACTGAATACATATATTTCCTGTCATATTCCATCTTAAAAGCAATTGATATCAAGTAGAGTTGCACAATATGTATATAAATCACACCTTAGGA ATTGAGGTAGGAGATGTGGGACATCCAACACCTGCTTCATAGTTGCCTGTCGGACTAGGCGATACACGGTGGAACTACATGGAGATGGGCTCTGACCATC AAAGAATGATGAAGTTAGGTGCTGATTTTGATACATGTTAAATTCCATCTTAAAACAATTGCCATTAAGTGGAGTGTCTTGATCAGTAAGTGTATATATA CCGCAGTCCTCAGGAGTATAACCCAAACCATTCGTTAACAACTTCTTTTAATATACATTTTTTATAGCACCCTCAATTTGATTATGAGAATTTCATTCAC TTTCATAGTTATTTTAAACTCAAAATATGACTTCAAATATTTTTGTTTCATAGGTTCACATAATTATCCCATACCCAAATAAATTCATAATTGTCTTTGA CTAACAAGAATTTAAGTATATGCTCATTTTACTTAATGATCCTTATATAATTAATGTTCATAATTGCTTGCTAATTTATGCATTTATTTATACATATTAT GTAATTATTTTCAAGTGTTTGACGAAGGATACAATTATCTTGAACTAGTACAATAACATAAAAATTGGTGCATTTTCTCAAGGAAGAACTAACAAAAACA AATTTTGCTTCAATATAGTAGCTCTCCCAAATATAGTAACTCCCACCTAGAGGGTGAGCCTAAGCGTAATCTGGAGCTCATGGATTCAAATCCTCGAACC AGGCTTTTTGCTTGTGAAGGTAAGGTTACGTATATCTATCCTCTCTAGATCCTACTAGGTGAAAGCCTTATGTACTGAGCTGCCCTTTTTATAGTAGCTC TCCCAAAATATTTAGTCAAGATCCGCCATAGGGGATGATGTAGATTGGGTTATCTATTTTATAACGGGTTCTAGGAATTCAATTATTTATTTTGTTTTGA ACTTAGGTATTTGATTCACAATTGGTATTTTTAATTTATGGATTTTATTTCTAATTAAGGATATTATTTGTTTTGCTATTTTATTATTATGGGCCATTAA GAATCTAATGCTATTTTTGCTACCCACCCGGTACTGTTTTTCTTACCCATCTAATGCTATTGTTGTAAGTAAATAACAACAACAATATTAAGAAGGATCT AAGGTCATGCACTGCCATCCATGTACTGTGAAGAAGAGAAACTCCGGGGATGCAGGAGAAATTAGAGTAGGATTTTTGTTATAATTGATAACATTCTTCT CTACTAGGATAAATAAATAATGCAGCTTGAGGACGTAGAAGATCTTCTCCAGCAGTTTTCAAAATGTTGCCAAAACAATATTGTTCACATTTGATGTTAA GAAATGGGCTACTAGCTTGAACATGACTTTCACTTATGTTGATAGTTGCATACATATAGTGTTTGATTATTATTTTTTCAGCCTGATTGTTGTTTTCCCT TCAGCTGAGATAACTAGCTGGGTATTTCAGGGCTCTGTAAATTGCGCTGTTTCCCACCTGTTGCACTCGCATGGGATGATATATCTGGTCTTCATATATA TCCAAATTTGAATAGCGACACACTTTCTGTTGATTCATCACCAGCACAATGGAGTTCGACTCAGCAATCTGAGAAAACCATTGTTCTTTTACTGGTTGAC CCACATTGTTCTTATAAAAGTAGCATTTCAATTTCGGTCAGTGCTGCTGCAAGTAGGCTTTTTCTGTTGTATAGTCCAAAGGTAATGAATTTCTGTATAC CTGATTTCCATAATTTCATATAATCTGCATTCTATTTATTAATTTGAACTTGAAATATTCAGATGCGTTTCTGACAAATATATACTTGGGTTTCCATTGG CAGTTCTTTATCATTTATTTTCTTTTAGGGATATAGTAGAACAATCCATGTGACTTCACCTAACAGTTTAAACTTTTGGGAGATTTTGTTCGTGACTTGG TATTAGAGCTTCTGTGACCAAATGGTCTAGTGTTCAACTTGTACCACCCCTCATAAATGAAAAAGTTGAATCTTTGCCCATGGTAAAGATGGGATTTTAT TGTCCATGCTTTTATAGCCAAAGGGCTGGCAAAAGGAAATTTAAAATGGTAATGACTAATTTATTCTTTTAGTCTCCTTATCTGTATATATAGTGAGAAA TAGAGACAAGTCAATATAGGAAAAATAGGTTAAGCCTGCAAGCCCAACAACGCATAGTAATCTAATAGCTATTTTCTAATACCCTCTGTGAAGCTGAAGC ATAGATATTAATCATGTTCAGCTTGTTATTACAAATATAGAATATTCTATTCTTGCTGAGTACTTTGTTGAAAATTTCTGTTAGTTGTTCTCCAATGACA ACAAGCCTCTATTGAACCTTTTCCTGCACAAATTGGAAATTGACCTCCATATGGTTTGGTCCTTCATCAAAAACACAATTGGAGGCAATATTAGTGGCTG CATGATTATGTCAACATAATTTCGCAAGCATTTCACTCTTGAGCCATGTCACGATATTTTGATGTGGCACTAGACCGAGCAACATGTTGCCTTCTTACTT TTCCCAAGACACAAGGTAACACCAATAAATTAAAATAACACAATAGTCTGAAGTGGTTCTCCTATCAATAGAGGATCTAGTTCAATTACCATTACAGATA ATTGTTCCACTGTAGTATTTCCATTATCTCTATACCTGACGGCTGACGCCACAACATAGATCTCCTTTCAAATATTTCATATATGAACTGCCTCCCACTG GTTTGTCCTCTCTGATTGGCAGCAACGTCCCTGGATACCAGTAACAGCACCACCGGAATCCCAGACTGAAACTCAATTAATATAAGTTATAGAATGATTA GAATCATTCCCAAACCACCAAAAATCATATGAAATTGTGTTCAACAGTACAAAAAATTACTCACCTTTGGAAGTGCTAGATTGGCTGTTTCTAGGTAGGA ATTAGGGAATGGTGTCCCCTTTTTAGGGTTTAGGTTTCTTTCATGGCAGCAATTTTTATATTAGTACTGGCTCTTTAATATGTTAAAGGAAATTAACTAC CAGAATCTTCTGGTCTCTATACTCTCTCTCTATACATATACATATATATATATATATATATATATAAATATATATATGTATGTATTGAGAAATAGTGATT AGTCAGCACGGGGAAATATGCAC BLAST |
Tissue | pods |
Gene name | LI_gene_142255; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_281280
Blastp | GPI inositol-deacylase from Aspergillus with 33.42% of identity |
---|---|
Blastx | GPI inositol-deacylase from Aspergillus with 33.59% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447433.1) |
Pfam | PGAP1-like protein (PF07819.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |