| Id Trinity | TRINITY_DN46100_c3_g1_i24 |
|---|---|
| Name Transcript | Ll_transcript_281305 |
| Sequence | CTTGTTTCTCACTTTCTTTTGTTCTTTTCTCTGTATAATCCGAAATTTTTAATTCTTTTTCTTAATTTTCGTGTTTGTTTAATGCGGAAATTTAGATCTC GTTACTAACTAATAATATTTGATCTGTTTCAGTAGCAACTGCATGAATCTGAAGCTGAAACAATTGTTCAATAAACTCGCGATCTGAATCGTTTCTGTTA TAGTGCGTAGTTTAGTTAACTACGTTGATTCTTCAAGCTCTGTTTCAAATTTGAGCTCGTGATACTTGCTATTTTTAGCTCTGAACTTGAAATTAGAAAG TGAAGTTTTTAGTGATTTGAAGATTTTGAAGTAGAAGGAGGTTCGTGACAATGGCGCGATTTAGATCGAAAATTAGGGTTGGAATCTTGATTACTGTTGT CGTTGGAGTTTGTCTTGCTGCTTTGTATGGTTTATTGCAGCCTATATCGAATGGATGTATCATGACCTACATGTATCCCACGTATATTCCTATTTCATCG TCGGAAAGTGTTTCTCCGGCGAAGTATGGCTTGTACTTGTATCATGAGGGCTGGAAGAAGATAGATGTTAAGGATCACCTGAAGAAGCTTAGTGGTGTGC CTGTGCTTTTCATCCCGGGAAATGGTGGTAGCTACAAACAGGCAAGGTGCGGTCTTTGGCAGCAGAATCTGATAGGGCATATCAGAGTGGCCCCCTTGAC CGTACATTTTATCAAGAAGCTTCCCTAAGTCCTGAAGAAGGAGGTGCATATACAGATTTATCTGGTTTCCAATTACCCAACAAGTATACTAGAAGGCTGG ACTGGTTTGCTGTTGATCTTGAAGGTGAACATTCTGCAATGGATGGTGCCATTCTTGAAGAACACACTGAATATGTTGTATATGCTATACACAAGATTTT GGACCAATATAAAGTGTCTTATGATGCTCGTACTAGTGAAGGTGTCGCAGTTTCTGGGAGTTTGCCAAAAAGCGTGATATTAGTTGGTCACTCTATGGGT GGTTTTGTCGCTAGAGCTGCTGTTATCCACCCCCGTCTTAAGAAATCAGCAGTTGAAACTGTTCTTACACTCTCAACCCCACATCAATCACCTCCTGTGG CATTGCAGCCCTCCTTGGGTCATTACTTTGCACATGTAAATTCAAAGTGGAGAGAGGGATATAAGTTTCAGGCCAACACAGGACGTCATGTGTCTGATCC TGTACTTTCCCATGTTGTCGTTGTATCTATTTCTGGTGCATATAACGATTACCAGGTTCGGTCAAAATTAGCATCACTGGATAATATTGTGCCCCCAACA CATGGCTTCATGATAAGCAGTACAGCCATGACAAATGTGTGGTTGTCAATGGAGCATCAGGCTATATTATGGTGCAATCAATTGGTCGTCCAAGTATCAC ACACACTTCTTAGTTTGGTAGACTCCAGAACTGGCCAACCTTTTCCTGAAACTCAAAAGAGACTTTCAGTATTCTCAAGAATGCTGCGTAGTGGAATATC CCATAATTTTCACTCAATGATGCAGTTGGCCTCTTCTAAACGACAGTCAATAAACATTCCTGTCGGCAATACAAAAGATGCAACTGGGTTTCAACTTGAA GTGCATAATGCGTGTCCGCCCAATATTCAATGGAATGATGAGGGCCTTGATAGAGACCTATACATTGAGACTAATGTGGTGACTGTTTTAGCAATGGATG GTCGAAGGAGGTGGTTGGACATACAAAAACTGGGATCCAATGGAAGAAGTCATTTTGTGTTTGTGACCAACCTTGAGCCATGTTCTGGAATTAGACTTCA TTTGTGGCCCAAAAAGAGGAACTCTGCTTCAAGTTTGCCTTCCAATGTTAGGGTTACTGAAGTAACATCAAAGATGATGCACATTCCCTCAGGTCCTGCA CCACGCCAGCCTGAACCTGGCAGTCAGACCGAGCAAGCTCCTCCATCTGCAGTATTTTGGTTGGGACCTGAAGATATGTTAGGCTTCAGTTTTCTTACTA TCTCGGTTGCGCCTCGTCCGACTGTTTCAGGAAGACCACCACCAGCAGCATCCATGGCGGTTGGGCAGTTCTTTAACCCACATGAAGGGAATCAAGATTT ATCTCCATGGTTTATGCTTCAGTCTACCTATTCTCAGAAGGAGTTGTCATTGGAGGAAGCTCATCCTTTGGCTGTCAAATTATCCTTTGCCATCAGCTTG GGTCTCCTTCCTGTTACCTTTTCTTTGAAAACTGTCAGCTGTGGAATTAGAAACTCTGGACTTCCAGAAGAGGAAGCTGGAGACATTGAAAGTAGTAGTA AGAAATTTATTTTTGTCATGAGGTTACTGTTTCTGTGCTTGTTTTTTCTGAAGTTATATGATATATTGATTGCAAACACATTTTTGTAGCCAGTGAGATA TGTTTTGCCAAAAAAAATTGGTTATAATGTTAGAAGTTAGAATTGAAGCACATATTAAACATTTGGCTAGCTGCTCAATATGCTGATGACTAAAATTGTA ATAAGCTCTTAATTAATTAGACATTGGAAATTTAGGATCATAGGAATTGTTTATGTTCTAATTTATGTAAATGTAAATATAAGATGTATTTATTCTTTGA TGCATATAAGTATAGTCAACTGAGTGCAACTACACAATTTTTGTCATATCCTTGCTTAGTTCTATATGTTTCCATAGGCTCATGATCCCTCACATCATTG TGCATGATAATTGTTTCTGGTGCTCCTTGAACAAACAGCCATGCCTCTCATAGCTGCAGTTTTTAGGTAGTGTTTGGCATGCAAATAGGATGGAACAGAA CAGGACATACATGTCTTGCATACCGTGTTTGGAGAAACTCGATAGGACAGGACACTCACTGAATACATATATTTCCTGTCATATTCCATCTTAAAAGCAA TTGATATCAAGATGGAATATGACAGGACATACATGTCTTGCATACCGTGTTTGGAGAAACTCGATAGGACAGGACACTCACTGAATACATATATTTCCTG TCATATTCCATCTTAAAAGCAATTGATATCAAGTAGAGTTGCACAATATGTATATAAATCACACCTTAGGAATTGAGGTAGGAGATGTGGGACATCCAAC ACCTGCTTCATAGTTGCCTGTCGGACTAGGCGATACACGGTGGAACTACATGGAGATGGGCTCTGACCATCAAAGAATGATGAAGTTAGGTGCTGATTTT GATACATGTTAAATTCCATCTTAAAACAATTGCCATTAAGTGGAGTGTCTTGATCAGTAAGTGTATATATACCGCAGTCCTCAGGAGTATAACCCAAACC ATTCGTTAACAACTTCTTTTAATATACATTTTTTATAGCACCCTCAATTTGATTATGAGAATTTCATTCACTTTCATAGTTATTTTAAACTCAAAATATG ACTTCAAATATTTTTGTTTCATAGGTTCACATAATTATCCCATACCCAAATAAATTCATAATTGTCTTTGACTAACAAGAATTTAAGTATATGCTCATTT TACTTAATGATCCTTATATAATTAATGTTCATAATTGCTTGCTAATTTATGCATTTATTTATACATATTATGTAATTATTTTCAAGTGTTTGACGAAGGA TACAATTATCTTGAACTAGTACAATAACATAAAAATTGGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_142255; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_281305
| Blastp | GPI inositol-deacylase from Coccidioides with 35.78% of identity |
|---|---|
| Blastx | GPI inositol-deacylase from Aspergillus with 32.17% of identity |
| Eggnog | post-GPI attachment to proteins 1(ENOG410YD9N) |
| Kegg | Link to kegg annotations (CIMG_05264) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447436.1) |
| Pfam | PGAP1-like protein (PF07819.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |