| Id Trinity | TRINITY_DN46100_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_281283 |
| Sequence | CGACACCATAACGAACAACAATATAAATTCAGTTCCAAACTTTTCTGCTTCACCCTCCTCCATTTTGTAATAACCTCTTTCTCTCTCTTTCCACCGTTAT CTTCTTCTTTTGCGGCGCTGCTCAAGTTACCACCGCCGGCGTCGGCGCCGCCGCCTGATACTTTTCAGATCTATGCATATTGTTTCAAATAGCAACTGCA TGAATCTGAAGCTGAAACAATTGTTCAATAAACTCGCGATCTGAATCGTTTCTGTTATAGTGCGTAGTTTAGTTAACTACGTTGATTCTTCAAGCTCTGT TTCAAATTTGAGCTCGTGATACTTGCTATTTTTAGCTCTGAACTTGAAATTAGAAAGTGAAGTTTTTAGTGATTTGAAGATTTTGAAGTAGAAGGAGGTT CGTGACAATGGCGCGATTTAGATCGAAAATTAGGGTTGGAATCTTGATTACTGTTGTCGTTGGAGTTTGTCTTGCTGCTTTGTATGGTTTATTGCAGCCT ATATCGAATGGATGTATCATGACCTACATGTATCCCACGTATATTCCTATTTCATCGTCGGAAAGTGTTTCTCCGGCGAAGTATGGCTTGTACTTGTATC ATGAGGGCTGGAAGAAGATAGATGTTAAGGATCACCTGAAGAAGCTTAGTGGTGTGCCTGTGCTTTTCATCCCGGGAAATGGTGGTAGCTACAAACAGGT GCGGTCTTTGGCAGCAGAATCTGATAGGGCATATCAGAGTGGCCCCCTTGACCGTACATTTTATCAAGAAGCTTCCCTAAGTCCTGAAGAAGGAGGTGCA TATACAGATTTATCTGGTTTCCAATTACCCAACAAGTATACTAGAAGGCTGGACTGGTTTGCTGTTGATCTTGAAGGTGAACATTCTGCAATGGATGGTG CCATTCTTGAAGAACACACTGAATATGTTGTATATGCTATACACAAGATTTTGGACCAATATAAAGTGTCTTATGATGCTCGTACTAGTGAAGGTGTCGC AGTTTCTGGGAGTTTGCCAAAAAGCGTGATATTAGTTGGTCACTCTATGGGTGGTTTTGTCGCTAGAGCTGCTGTTATCCACCCCCGTCTTAAGAAATCA GCAGTTGAAACTGTTCTTACACTCTCAACCCCACATCAATCACCTCCTGTGGCATTGCAGCCCTCCTTGGGTCATTACTTTGCACATGTAAATTCAAAGT GGAGAGAGGGATATAAGTTTCAGGCCAACACAGGACGTCATGTGTCTGATCCTGTACTTTCCCATGTTGTCGTTGTATCTATTTCTGGTGCATATAACGA TTACCAGGTTCGGTCAAAATTAGCATCACTGGATAATATTGTGCCCCCAACACATGGCTTCATGATAAGCAGTACAGCCATGACAAATGTGTGGTTGTCA ATGGAGCATCAGGCTATATTATGGTGCAATCAATTGGTCGTCCAAGTATCACACACACTTCTTAGTTTGGTAGACTCCAGAACTGGCCAACCTTTTCCTG AAACTCAAAAGAGACTTTCAGTATTCTCAAGAATGCTGCGTAGTGGAATATCCCATAATTTTCACTCAATGATGCAGTTGGCCTCTTCTAAACGACAGTC AATAAACATTCCTGTCGGCAATACAAAAGATGCAACTGGGTTTCAACTTGAAGTGCATAATGCGTGTCCGCCCAATATTCAATGGAATGATGAGGGCCTT GATAGAGACCTATACATTGAGACTAATGTGGTGACTGTTTTAGCAATGGATGGTCGAAGGAGGTGGTTGGACATACAAAAACTGGGATCCAATGGAAGAA GTCATTTTGTGTTTGTGACCAACCTTGAGCCATGTTCTGGAATTAGACTTCATTTGTGGCCCAAAAAGAGGAACTCTGCTTCAAGTTTGCCTTCCAATGT TAGGGTTACTGAAGTAACATCAAAGATGATGCACATTCCCTCAGGTCCTGCACCACGCCAGCCTGAACCTGGCAGTCAGACCGAGCAAGCTCCTCCATCT GCAGTATTTTGGTTGGGACCTGAAGATATGTTAGGCTTCAGTTTTCTTACTATCTCGGTTGCGCCTCGTCCGACTGTTTCAGGAAGACCACCACCAGCAG CATCCATGGCGGTTGGGCAGTTCTTTAACCCACATGAAGGGAATCAAGATTTATCTCCATGGTTTATGCTTCAGTCTACCTATTCTCAGAAGGAGTTGTC ATTGGAGGAAGCTCATCCTTTGGCTGTCAAATTATCCTTTGCCATCAGCTTGGGTCTCCTTCCTGTTACCTTTTCTTTGAAAACTGTCAGCTGTGGAATT AGAAACTCTGGACTTCCAGAAGAGGAAGCTGGAGACATTGAAAGTAGTAGTAAGAAATTTATTTTTGTCATGAGGTTACTGTTTCTGTGCTTGTTTTTTC TGAAGTTATATGATATATTGATTGCAAACACATTTTTGTAGCCAGTGAGATATGTTTTGCCAAAAAAATTGGTTATAATGTTAGAAGTTAGAATTGAAGC ACATATTAAACATTTGGCTAGCTGCTCAATATGCTGATGACTAAAATTGTAATAAGCTCTTAATTAATTAGACATTGGAAATTTAGGATCATAGGAATTG TTTATGTTCTAATTTATGTAAATGTAAATATAAGATGTATTTATTCTTTGATGCATATAAGTATAGTCAACTGAGTGCAACTACACAATTTTTGTCATAT CCTTGCTTAGTTCTATATGTTTCCATAGGCTCATGATCCCTCACATCATTGTGCATGATAATTGTTTCTGGTGCTCCTTGAACAAACAGCCATGCCTCTC ATAGCTGCAGTTTTTAGGTAGTGTTTGGCATGCAAATAGGATGGAACAGAACAGGACATACATGTCTTGCATACCGTGTTTGGAGAAACTCGATAGGACA GGACACTCACTGAATACATATATTTCCTGTCATATTCCATCTTAAAAGCAATTGATATCAAGATGGAATATGACAGGACATACATGTCTTGCATACCGTG TTTGGAGAAACTCGATAGGACAGGACACTCACTGAATACATATATTTCCTGTCATATTCCATCTTAAAAGCAATTGATATCAAGTAGAGTTGCACAATAT GTATATAAATCACACCTTAGGAATTGAGGTAGGAGATGTGGGACATCCAACACCTGCTTCATAGTTGCCTGTCGGACTAGGCGATACACGGTGGAACTAC ATGGAGATGGGCTCTGACCATCAAAGAATGATGAAGTTAGGTGCTGATTTTGATACATGTTAAATTCCATCTTAAAACAATTGCCATTAAGTGGAGTGTC TTGATCAGTAAGTGTATATATACCGCAGTCCTCAGGAGTATAACCCAAACCATTCGTTAACAACTTCTTTTAATATACATTTTTTATAGCACCCTCAATT TGATTATGAGAATTTCATTCACTTTCATAGTTATTTTAAACTCAAAATATGACTTCAAATATTTTTGTTTCATAGGTTCACATAATTATCCCATACCCAA ATAAATTCATAATTGTCTTTGACTAACAAGAATTTAAGTATATGCTCATTTTACTTAATGATCCTTATATAATTAATGTTCATAATTGCTTGCTAATTTA TGCATTTATTTATACATATTATGTAATTATTTTCAAGTGTTTGACGAAGGATACAATTATCTTGAACTAGTACAATAACATAAAAATTGGTGCATTTTCT CAAGGAAGAACTAACAAAAACAAATTTTGCTTCAATATAGTAGCTCTCCCAAATATAGTAACTCCCACCTAGAGGGTGAGCCTAAGCGTAATCTGGAGCT CATGGATTCAAATCCTCGAACCAGGCTTTTTGCTTGTGAAGGTAAGGTTACGTATATCTATCCTCTCTAGATCCTACTAGGTGAAAGCCTTATGTACTGA GCTGCCCTTTTTATAGTAGCTCTCCCAAAATATTTAGTCAAGATCCGCCATAGGGGATGATGTAGATTGGGTTATCTATTTTATAACGGGTTCTAGGAAT TCAATTATTTATTTTGTTTTGAACTTAGGTATTTGATTCACAATTGGTATTTTTAATTTATGGATTTTATTTCTAATTAAGGATATTATTTGTTTTGCTA TTTTATTATTATGGGCCATTAAGAATCTAATGCTATTTTTGCTACCCACCCGGTACTGTTTTTCTTACCCATCTAATGCTATTGTTGTAAGTAAATAACA ACAACAATATTAAGAAGGATCTAAGGTCATGCACTGCCATCCATGTACTGTGAAGAAGAGAAACTCCGGGGATGCAGGAGAAATTAGAGTAGGATTTTTG TTATAATTGATAACATTCTTCTCTACTAGGATAAATAAATAATGCAGCTTGAGGACGTAGAAGATCTTCTCCAGCAGTTTTCAAAATGTTGCCAAAACAA TATTGTTCACATTTGATGTTAAGAAATGGGCTACTAGCTTGAACATGACTTTCACTTATGTTGATAGTTGCATACATATAGTGTTTGATTATTATTTTTT CAGCCTGATTGTTGTTTTCCCTTCAGCTGAGATAACTAGCTGGGTATTTCAGGGCTCTGTAAATTGCGCTGTTTCCCACCTGTTGCACTCGCATGGGATG ATATATCTGGTCTTCATATATATCCAAATTTGAATAGCGACACACTTTCTGTTGATTCATCACCAGCACAATGGAGTTCGACTCAGCAATCTGAGAAAAC CATTGTTCTTTTACTGGTTGACCCACATTGTTCTTATAAAAGTAGCATTTCAATTTCGGTCAGTGCTGCTGCAAGTAGGCTTTTTCTGTTGTATAGTCCA AAGATAGTTGGTCTCTCTATTGCTGTTATTTTCTTTGCTCTAATGCAGCAAGCATGTTCATCAGATCTTGATCTGCGAATACCTTCAATGCTGACTGCTG TGGAATCCAATTTGACACTACTATCACATTTCTTTCCTCTAGCCGTTCTACCAATTTTCTTTTCCTTTTTCTTTTCCTTAGCAACCTCTCAGCCATTTCC TCCACTTGCTAGCTTCTTCGGCATCTCTCTAATTTGTTATATCTTTGCAAACGGGTTCATAGCTATTCTGATTTTAATATCTCACTTGGCGTTCTTTGTG ACTGCTGTTACACATATTTTCATCAAGACAAGGTTAGAAAACTGATTTTTACTACCTTAAATTGTAGTACATGTATATCTCTCTAATATAAAATTAGGTA GCCTTATTCATAATGGCAATCTGGCTACAGAATCACATTTCTATTTAAAATCTAGTTTTATTCTCCTGTCTCTAGGCATAGAGTTTTATAAGTTTCTTAA TCAATCATAAGAGTGCTAATCATTCTGCTACATTTTAAATGGTAAATGACTGGTAAATATTTTGCAGGTGGCAAATGTGGGAGCGGTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_142255; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_281283
| Blastp | GPI inositol-deacylase from Aspergillus with 33.42% of identity |
|---|---|
| Blastx | GPI inositol-deacylase from Aspergillus with 33.59% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447433.1) |
| Pfam | PGAP1-like protein (PF07819.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |