Ll_transcript_281781

• Id Trinity: TRINITY_DN46101_c0_g1_i5
• Name Transcript: Ll_transcript_281781
• Sequence: TGAAAAACCAAAACAAAGAAGACACGACACATATGTAAATGAATGAATGAAAAAAGAGGTTTTGATTTTTGAAGAACACAAATACAATGTGTTTGTAACC TTTGTGAGGAATCGCAAGTGTTTATGTTTAAGAATGGAAGTAGAAGATGAGTGGGATTTGAGCACAGAAGAACTTGATTCTCTCGAAAGAGACGCTTTTC AAAAGATTGCTCAATTACGCAATTCCCAATCTCAACCCCAACCTTCTCCTTCTCTTTCTTCTCAACCCCTTTCTACACCTTCTCCTACATACCCTAACCC TTTCCCAGATTCACGTCCACAAAAGGTTGAGAATTTGTCTCAAGGTGCTAGAGCATTACCCACGTCATCGAAATCAAAAGGGTCAAGCCAAGGTGTACCT TCAAAAGAATTGCCGAAGCTATCGGTCAAATTTTTTCTTCATTCAAGTGGAAGTGTTGCAGCAAAATTTCAATATGAGCAGGTAGTAGTTGCTGCTTTTC GCAAAATCTCTAGAGCTTCATGGAATGCAAAAGAAAGGTTATGGATGTTCCCTCTATCTTCTTTGTCAGAAGCAGAAAAGATACTTGGAGAAATATCTGG ATACAATGTTCAGGTGGAGAACATAGATCCCTTAGCACACCGGGCCATTACTGCTGCATCTGCTGTTCCAGATCTTCGAGATCGATATGACAAGATCCCT AGCTATGTCGAAACAAAGCTTTTGCCGTTTCAGCGAGATGGTGTCAGGTTTATATTGCAGCATGGAGGACGTGCTCTTTTAGCAGATGAAATGGGATTAG GGAAAACTTTGCAGGCTATTGCTGTAGCTGCATGCATTCAAGACTCGTGGCCTGTTCTCATAATTGCACCATCTTCTTTACGCTTGCAATGGGCTTCTAT GATTCAACAATGGCTGAATATTCCTTCATCCGATATACTTGTTGTCTTGTCTCAAAGTGGTGGATCAAATAGAGGAGGGTTCAATATAGTATCTTCAAGT GGTAAAAGCAGAATTCACCTGACTGGACTGTTCAACATTATCTCATATGATTTGGTGCCAAAGCTACAAAATATGCTTATAGCATCAGACTTTAAGGTTG TGATTGCAGATGAATCACACTTTCTAAAAAATGCTCAGGCAAAAAGGACTGCTGCTTCTCTTCCGGTTATAAAGAAAGCTAAATATGCAATTTTGCTTAG TGGAACTCCTGCTTTATCCCGACCAATTGAATTATTCAAGCAGTTGGAAGCCTTGTATCCTGATGTATACAAGAATGTTCATGAATATGGTAACCGATAT TGCAAGGGTGGAGTCTTTGGTGTTTTTCAAGGTGCAAGTAACCATGATGAATTGCACAATTTGATGAAGGCAACAGTAATGATTCGTAGGCTTAAAAAGG ATGTTCTTTCTGAACTTCCTGTGAAGCGCAGACAACAAGTTTTCCTAGACTTGGCTGACAAGGACATGAAGCAAATTAATTCTTTATTTCGTGAGCAAAT TTTATCCAACATAGTGATCAGAGCTTCGTGCATCGAGCCGTCTTCTTCTTACATTGATGATAAGTTTCTTACCAAAATTATGTCATTTCACTTTGAAGTT GTAATATTTGTAGATTGAATTTGTATATTTAGTTGGAGGTGGTAAAGGCCAACCGATAAAGTTTTCCTTCAAAAATTGCAAAAAAAGTGTTGATTTTGTT TTGCAGTTGGAGATGGTTAAAGCCAAAATTAAGGAATCTAAATCAAAAGATGAGGCTGAATCACTTAAGTTCACTCAAAAGAATCTTATTAACAAGATAT ATACTGATTCTGCAGAGGCCAAGATTCCATCTGTTCTTGATTATGTTGGTACTGTGATTGAGGCAGGTTGCAAGTTTCTTATATTTGCACACCATCAGCC AATGATAGACTCGATACATGAGTTTCTTCTTAAGAAAAAAGTTGGTTGCATACGGATTGATGGGGGTACACCTGCTGCATCAAGGCAACAATTGGTGACA GAGTTCCAGGAAAAGGATGCCATAAAGGCAGCAGTGTTATCTATTAAAGCAGGAGGAGTTGGGTTAACTTTAACTGCTGCAAGCACAGTCATCTTTGCAG AACTGTCCTGGACTCCAGGTGACCTTATTCAGGCTGAAGACCGTGTTCATAGAATTGGCCAGGTGTCTTCTGTAAATATATACTACTTGCTGGCCAATGA CACAGTTGATGACATCATCTGGGATGTAGTGCAAAGCAAACTGGAAAACTTGGGACAGATGTTAGATGGGCATGAGAACACCTTAGAGGTCTCAGCAAAT CAACCAGAGAATTGCTCTGCAAAGCAAAAAACTCTTGACGAGTTTGTTAGAAGATGTGATGGCAGGGATGAGTTGGAACATCAGTCCAACCCCAAACGTT CTCGGCCCTGACCCCGGACTTCTTCAAAATGGTGCTCAAATGGGAAAACAATTGCATGTTGGCACTGAATTTTTGATGCCACGAGAAGGGCTTTTACAAG TGGATGTAGCTAAAAGAAATGGAACACTAAACTATGCTGCTGGTGCTGAGGTGATCTGGCTTCTGAAATATGTATTAGGTGAAAATAGTGATGAAGTCAA CCAATTAGATTTTCGGTTTTATCTACTAGTTGTCCCCTATAGTTGTTTTTGGGGCTTGTATTTTGTATAGATGACATTATCATATGTATGACACTTGCAA ATTGCTTCACTCAATACAATGTTTTAGTATTGCTGTCAGAAATTGAGTCCGAGTA
• Tissue: pods
• Gene name: LI_gene_142262;
• Additional information: details;

Expression of Ll_transcript_281781

FPKM

• PAB: 1.6
• PNAB: 1.3
• PS1: 0.3
• PS2: 1
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281781

• Blastp: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 from Homo with 40.38% of identity
• Blastx: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 from Homo with 40.38% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (50485)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419023.1)
• Pfam: SNF2 family N-terminal domain (PF00176.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;