| Id Trinity | TRINITY_DN46104_c2_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_282315 |
| Sequence | GAAAATATGAAATATCGGAAAGAGAGAGAAGGCGTTTTGAAGTCCAAGTCTAAGTCGCTTCTTCCTGTTCTTCTTGTTCTATTGCATCAGCCATTAGGGT TTCTCATTCTTCTTCAATCCAATTTAGGGTTTTACCCTTCACAATACATGTCTGACCGTTTTCAACTACAATTTGTGATTGACTATGCAAACTTCATGGG CTGATTTGGCTGCAAATTCTGCAGCTGATAATGCTAACAATTCAGTTCCTCCTTCACGATCGGCTTATGTCCCTCCACATCTTAGGAACCGTCCACCCCT ATCAGCTGAATCCCCTGCTGCTCCTCCTCCTGCCTATAGTGCTCCCTCTTTGGCTTCCGCTTCCGTTGCTGGTGCTGGTAGGTGGTCCTCTCCTAGGAAT GAGTACCGTACCCAGCCTGTTAGCAGTGGCCATACAAGTGGATGGGGTAACAAAAGTGGCGGATGGGATCGTGGGAGGGACCATGAAGTCAACCCCTTTG CAGAACATGATGATTCTGATCCGGCATTCACTGAGCAGGAGAATACTGGAATAAATTTTGATGCATATGAAGACATTCCTGTTGAGACCACTGGTGAAAA TGTTCCTCAACCCGTCAACACATTTGCAGAAATTGACTTGGGTGAAGCACTCAATGAGAATATACGAAGGTGCAAATATGTGAGGCCAACACCTGTTCAA CGCAATGCCATACCAATATCACTCGGTGGACGAGATTTGATGGCTTGTGCACAGACTGGCTCTGGAAAGACGGCTGCTTTTTGTTTCCCGATTATCAGTG GAATTATGCGGGGACAGCCAGTGCAAAGGCCACCTCGTGGGGTGCGTACTGTGTACCCACTTGCCCTTGTTCTCTCACCAACGAGGGAGCTCTCAATGCA AATACATGAAGAAGCTAAGAAGTTTTCATACCAAACGGGGGTTAGGGTGGTTGTTGCTTATGGCGGAGCTCCAATAAACCAGCAGCTACGGGATCTTGAG AGAGGGGTGGACATTCTTGTAGCAACTCCAGGTAGACTGGTAGATTTGCTGGAGAGAGCTAGAGTTTCATTGCAAATGATCAGATATCTGGCTTTAGATG AGGCAGACAGGATGTTGGATATGGGTTTTGAGCCTCAGATAAGGAAAATTGTGCAACAGATGGACATGCCCCCACCGGGTGTCAGACAGACTATGCTCTT TAGTGCGACGTTCCCTAGAGAGATACAGGTTTGATTCATTCTGTAAAATATGCATTTGACCTTTGAGCGAAGCATTCTTTCATCTAAATGTGTGTTTTAA TTTCAAATAAAAAACGTGTTTCTTAATTTTGCTAGGTTTTCTATCTCATTGGGGGCAGTTAGACTTTTTTTATTATTTTTTTACCCCTTTCTCTTGATGT GCATAAGTGTTTTTGATATCCATAGTTTCACGGTTGGTTGGAGTTTCAAAAAGGCGCATTCATCTATTTTCAGTAGATGTGCTTTTACATTTGCACTTTA CAGTGTTGCTCATCACTAACTTGAGGTGCATTTTTTCGTCACATTTGCATTCAGGGTGTTGGACCTTGAATCACACCATCAACTTCTATTCTCAGAAAGA CCAACTTCGTTGTGGTAGTGTTTGGTACAGAGAATGTGTGCACAGATTTTGCCATGTCTCTTTTCTCTCTTTTTTTAACACACCCTAACTTAGTAGGGTC TATGGTAGAATCAATTGGTTATGTATAGGGTAGTTGGGGAGAAAAGTGGACGTAGAATCTGATGCTTTGGAATTTTCGATTGGTCTTATGGCATGTTCAG GAGCATGATGTAGATATTTCTGTGTCTTTTCTTGTTCTCTTTCCATATTTTGCACTTCCTTTGTTTCTGGTACAATAAGTCCGCATCATATTTTTTCACT TGAGTTGTGATGATAAGTGGACTAAGAGGTATAAATAGTGCACGTGAATGTTATTTGTAGATAATGTAGCTTCCTGATTACTTCTTTCGATTTTGTTGTG AATTATGGTTGATATGCAGAGACTGGCAGCTGATTTCCTTTCAAATTATATATTCCTGGCTGTTGGAAGAGTGGGCTCAAGTACCGATTTAATTGACCAA AGAGTTGAGTATGTTCAGGAATCTGACAAGAGAAGTCATCTCATGGACCTTCTTCATGCCCAGAGGGCAAATGGTGCCCAGGGAAAGCAAGCTTTGACAT TAGTTTTTGTGGAGACAAAGAAGGGAGCTGATGCACTGGAGCACTGGCTTTGTCTTAATGGTTTTCCAGCAACTACTATTCATGGTGACAGGACACAACA GGAAAGAGAATTCGCATTGAAGTCATTTAAAAGTGGCAACACCCCTATATTGGTTGCCACTGATGTGGCTGCACGTGGTCTTGATATTCCTCATGTTGCT CATGTGGCTAATGTTGACCTTCCCAATGATATTGATGATTATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_142273; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_282315
| Blastp | DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 70.24% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 84.85% of identity |
| Eggnog | purine NTP-dependent helicase activity(ENOG410XNTI) |
| Kegg | Link to kegg annotations (AT2G42520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416670.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |