Ll_transcript_282324

• Id Trinity: TRINITY_DN46104_c2_g4_i2
• Name Transcript: Ll_transcript_282324
• Sequence: GAAAATATGAAATATCGGAAAGAGAGAGAAGGCGTTTTGAAGTCCAAGTCTAAGTCGCTTCTTCCTGTTCTTCTTGTTCTATTGCATCAGCCATTAGGGT TTCTCATTCTTCTTCAATCCAATTTAGGGTTTTACCCTTCACAATACATGTACCCTTCTTCCTTCACTCTTATCTCTCTCTCTCTCAATTTATCAACACA TCATGTCGTTCTTCTCCACTCCCACCTTGCTTCTTCCTTCACTCTTATTTTGTTTTGTTACATTCTCAAACGTGTCTGACCGTTTTCAACTACAATTTGT GATTGACTATGCAAACTTCATGGGCTGATTTGGCTGCAAATTCTGCAGCTGATAATGCTAACAATTCAGTTCCTCCTTCACGATCGGCTTATGTCCCTCC ACATCTTAGGAACCGTCCACCCCTATCAGCTGAATCCCCTGCTGCTCCTCCTCCTGCCTATAGTGCTCCCTCTTTGGCTTCCGCTTCCGTTGCTGGTGCT GGTAGGTGGTCCTCTCCTAGGAATGAGTACCGTACCCAGCCTGTTAGCAGTGGCCATACAAGTGGATGGGGTAACAAAAGTGGCGGATGGGATCGTGGGA GGGACCATGAAGTCAACCCCTTTGCAGAACATGATGATTCTGATCCGGCATTCACTGAGCAGGAGAATACTGGAATAAATTTTGATGCATATGAAGACAT TCCTGTTGAGACCACTGGTGAAAATGTTCCTCAACCCGTCAACACATTTGCAGAAATTGACTTGGGTGAAGCACTCAATGAGAATATACGAAGGTGCAAA TATGTGAGGCCAACACCTGTTCAACGCAATGCCATACCAATATCACTCGGTGGACGAGATTTGATGGCTTGTGCACAGACTGGCTCTGGAAAGACGGCTG CTTTTTGTTTCCCGATTATCAGTGGAATTATGCGGGGACAGCCAGTGCAAAGGCCACCTCGTGGGGTGCGTACTGTGTACCCACTTGCCCTTGTTCTCTC ACCAACGAGGGAGCTCTCAATGCAAATACATGAAGAAGCTAAGAAGTTTTCATACCAAACGGGGGTTAGGGTGGTTGTTGCTTATGGCGGAGCTCCAATA AACCAGCAGCTACGGGATCTTGAGAGAGGGGTGGACATTCTTGTAGCAACTCCAGGTAGACTGGTAGATTTGCTGGAGAGAGCTAGAGTTTCATTGCAAA TGATCAGATATCTGGCTTTAGATGAGGCAGACAGGATGTTGGATATGGGTTTTGAGCCTCAGATAAGGAAAATTGTGCAACAGATGGACATGCCCCCACC GGGTGTCAGACAGACTATGCTCTTTAGTGCGACGTTCCCTAGAGAGATACAGAGACTGGCAGCTGATTTCCTTTCAAATTATATATTCCTGGCTGTTGGA AGAGTGGGCTCAAGTACCGATTTAATTGACCAAAGAGTTGAGTATGTTCAGGAATCTGACAAGAGAAGTCATCTCATGGACCTTCTTCATGCCCAGAGGG CAAATGGTGCCCAGGGAAAGCAAGCTTTGACATTAGTTTTTGTGGAGACAAAGAAGGGAGCTGATGCACTGGAGCACTGGCTTTGTCTTAATGGTTTTCC AGCAACTACTATTCATGGTGACAGGACACAACAGGAAAGAGAATTCGCATTGAAGTCATTTAAAAGTGGCAACACCCCTATATTGGTTGCCACTGATGTG GCTGCACGTGGTCTTGATATTCCTCATGTTGCTCATGTGGCTAATGTTGACCTTCCCAATGATATTGATGATTATG
• Tissue: pods
• Gene name: LI_gene_142273;
• Additional information: details;

Expression of Ll_transcript_282324

FPKM

• PAB: 2.2
• PNAB: 2.1
• PS1: 2
• PS2: 3.2
• PS3: 2.1
• PW1: 1.3
• PW2: 2.7
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282324

• Blastp: DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 75.1% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 76.49% of identity
• Eggnog: purine NTP-dependent helicase activity(ENOG410XNTI)
• Kegg: Link to kegg annotations (AT2G42520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416670.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;