| Id Trinity | TRINITY_DN46106_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_282000 |
| Sequence | AAATAATATGTTGCTAAATAGAGATGGCAAAATTGGCTGCTCTGCTCATTTTGCCTGAGTCCGCAAATTCCTAAAATAGAAAGAAGAATTCATTCATAAA ACTTGAAATTTTCTAGCAATATTTGATTTCAGGTGAATGGTGGAAATCAGATACTGAGGCTGTAATAAATGAAGCATTGAAATCTGGCTTGGCCTCAAAT GTCTCTGATGCTCACACAATCAATGGCCACCCTGGGCCTGTTAAAAATTGTGCTTCACAAGGAGGATTCAATCTCCAAGTTCAACCTGGAAACACTTACT TGCTAAGAGTAATCAATGCTGCACTTAATGAAGAACTTTTCTTTAAGGTTGCTGGCCACAAACTCACTGTTGTTGAGGTTGATGCAGCCTACACAAAACC TTTCAATACAGATACCATAGTTATAGCACCAGGCCAAACCACAAATGTACTTCTAAAAGCCAACCATGCAAGTGGAAAATACTTGATAGCAGTCTCTCCT TTCATGGATGCTCCAATTGCAGTGGACAACATAACTGCCACTGCCACTTTACACTACACAGGTTCCCTTGGTTCCACCATAACCACCCTCACTTCACTCC CTCCGAAAAATGCTACACCAATTGCCACCACTTTCACTGACTCACTCAGAAGCCTAAACTCCAAAAAGTACCCAGCCAGAGTCCCTATAAAAGTTGACCA TTCATTGTTTTTCACTGTGAGCCTTGGTGTAAACCCTTGTGCTACTTGTGTGAATGGTAGCAGGGTGGTTGCAGCTATCAACAATGTTACATTTATGATG CCTAAGATTTCTCTTCTTCAAGCACATTTCTTTAACATAAGTGGAGTTTTCACTGATGATTTTCCTGGAAAGCCTCCTGTGGTGTATGACTTCACAGGGA AAAAACAGCCAACAAATTTCAGAACCAATAGAGGGACAAGGCTTTATAGACTTCCCTACAACTCTACAGTTCAACTAGTGCTGCAAGATACAGGAATGTT AACACCTGAGAACCATCCTATTCATCTGCATGGATTCAATTTCTTTGTTGTTGGTAAGGGACAAGGAAACTTCAATGCCAAAAATGATACCAAAAAGTTT AACCTTATAGATCCTGTTGAAAGAAATACAGTTGGTGTTCAATCTGGTGGATGGACTGCTATAAGGTTCAGGGCTGATAATCCAGGGGTATGGTTTATGC ATTGCCATTTGGAAATTCATACAACATGGGGATTGAAGATGGCATTTGTGGTGGATAATGGTAATGGACCAAATGAATCTCTATTACCACCTCCAAGTGA TTTCCCTAAGTGCTGAAAAGAGTGGTAATTAATAATCTTTGCCTAAGGTGGAAGAAAAAAGAGAATCATATATTCCAACTCCAAGACTTAGTTGGAGCCA AAAAAAGGACAAGTTGTTAATAGTGGAATAAGACCAATTAACATGTTTTCACTTTGTATTTTTCTTCCCTTTTATTTTTTCATTTTTTGCATTGTTTGTA CTTGTTGAGTTTTTTTCTTTCTACAGTGATACTTTTGTTAACTTGTTTATTGCTAGTAGGTTGCAAAATTGGTTATTATGCAATAGAATTGAAGCACATC AAAATTGATTTTTCTGATTAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_142280; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_282000
| Blastp | Laccase-4 from Arabidopsis with 71.69% of identity |
|---|---|
| Blastx | Laccase-4 from Arabidopsis with 71.82% of identity |
| Eggnog | Multicopper oxidase(COG2132) |
| Kegg | Link to kegg annotations (AT2G38080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462133.1) |
| Pfam | Multicopper oxidase (PF07731.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |