| Id Trinity | TRINITY_DN46106_c0_g6_i1 |
|---|---|
| Name Transcript | Ll_transcript_281996 |
| Sequence | AGAAATGAAAATTCACTTTCTTTCATTTGCATCAATGAGAATTCTTGTGTTTGGTTTATGGGTTATAATAAGTTTATTTCCTGAGTTGGCAATGAGCATA ACAAGGCACTATACATTCAATATTGAGTACCTGAATGTCACAAGATTATGCCACACAAGGAACATTCTTAGTGTGAATGGGAAATTCCCAGGGCCTCCCT TAATAGCAAGGGAAGGTGATAGGGTACTAGTCAAGGTGGTTAACCATATCTCAAACAATGTAACCATTCATTGGCATGGAATTCGTCAACTAACAAGTGG TTGGGCTGATGGACCAGCATATGTGACACAATGTCCTATACAAACAAATCAATCATACACATACAATTTCACAATCATAGGACAAAGAGGGACTCTACTT TGGCATGCTCATATATCATGGCTTAGAGCAACCATTTATGGACCCATCATAATCCTACCTAAGCACAATCACTCATATCCATTTCAGAAACCATATAAGG AAATCCCCATTATTTTAGGGGAATGGTTTAATGTTGACCCAGAAGCTGTTATAAGTGAGGCCTTGAAGGTAGGAGGGGGACCCAATGTTTCAGATGCATA CACCATCAATGGTCTTCCAGGGCCTTTTTATAATTGCTCCAATAAAGATACATTGAAGCTAAAGGTGAAGCCAGGCAAAACATATCTACTGAGACTAATC AATGCTGCACTGAACGAAGAACTATTTTTCAGCATTGCAAATCACACTCTAACTATTGTTGAAGCTGATGGATCATACACCAAACCATTTGACACAGAAA CACTTCTCATAGCACCAGGACAAACAACAAATGTTTTACTCAAAACCAAACCATATTACCCTAATGCCACTTTTCTTATAGCTGCTAGGCCTTATTTTTC AGGCCAAGGTACCTTTGATAATTCCACTACAGCTGCTATACTTCACTACAACCACCATTCTCATATTACAAACTTAACTCTTCTAAAACCCACTTTTCCA CCAATAAATGCTACAAACTTTGTTGCAAACTTCACAGCACAGTTCAGAAGCTTGGGTAGTGATAAATTCCCTATTGATGTACCAAAGAAAGTTGACAAGA GTTTTTTCTTCACTGTAGGACTAGGTACTAATCCTTGTCCAAAAAACACAACATGTCAAGGGCCAAATAACACTACAAAATTTGCAGCCTCAGTGAATAA CATATCTTTTACACTTCCATCAGTTTCTATTATGCAAGATTATTATTCTGGAAGGTGGTCTAATAGTGTTTTCAACACTGATTTTCCTAGTTCTCCTTTG AGTACTTTCAATTACACTGGAACACCACCTAATAATACTAATGTTAACAATGGTACTAAGTTGGTGGTGTTGAAGTTCAATACTAGTGTTGAGTTGGTAT TGCAGAGTACTAGTATTCTTGGAACTGAGAGCCACCCTTTGCATCTTCATGGCTATGATTTCTTTGTTGTTGGACAAGGTTTTGGAAACTATGATAAGAA CAAAGACCCTGCAAAGTTTAATGTGGTTGACCCTGTTCAGAGAAACACTGCTGGTGTTCCTGCTGGTGGCTGGATTGTCATTCGCTTTCGTGCTGACAAC CCAGGTATATGCGTTTTTTATCGGCAAATGTTAATATGTTAGTATTCATGAATATTGATCAATAAAAAAGTAGGTGTGTAGAAAAAAATACTATATCATT TCTAATGTAAACAACAATATTTGTAGTAACATGCATGTGAGACAAAAACTGAGTCATCAATAATAATAATATGCTACACTTTAAGCTTTCTTATATTTTT TTAATAATCAAAAGTTAGATAGATATAATATAATATGTATAAGGTTACTGTCTAAAACATAGTAATCTAATCAAGTTAGTCACTTTCTATAACAAAAATT ATACATTATCCTTTTTGTAACAAATAGTTATAGCAGATAAAGAGACATTATCAAACATCATGCATAATGCATTAGTTTGTGAACTAGTTTGTCTCACATC ATTGACTCTTGTGGTTGCAACAACAGGGGTATGGTTCATGCACTGTCACCTAGACATTCATACAAGTTGGGGCTTGAGAATGGCATGGCTAGTATTAGAT GGACCTGGTCCTAACCAGAAGCTGCAACCACCACCTTCTGATCTTCCAAAATGCTAACTTTTATTGACCCTTTGGGTCCAAATGCATTGGCTTTGCTTCA TTTAATGTTTCCCCTTATATATTTTTTTTTGTCTTTGGACGACTATACCACCGTACCAGTAAAAAAATATCGACTACGAAATTTTTTTGTTACTAAAGAA ATAGTTGTGACATTTTTTTGTTACTTAATGTTTGGTTGAAGAGTGATAGTGAGAGGGTATTTGTCTTCTGATTGAATAATAAAAGCAGTGTCTGTTACTT AAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_142285; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_281996
| Blastp | Laccase-2 from Arabidopsis with 65.36% of identity |
|---|---|
| Blastx | Laccase-17 from Arabidopsis with 66.79% of identity |
| Eggnog | Multicopper oxidase(COG2132) |
| Kegg | Link to kegg annotations (AT2G29130) |
| CantataDB | Link to cantataDB annotations (CNT0001549) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450497.1) |
| Pfam | Multicopper oxidase (PF07732.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |