| Id Trinity | TRINITY_DN46115_c3_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_281167 |
| Sequence | GTTAGTCACATTTCATTATTAATATATCGAGAGTGAAGAAACACAATCGGAAAATCCTAAATAAAGTGCTTTTCTTTTTTTCATTCTATTGATAAAAAAC CTAAACTCAACTCAGCACAACACAACACAACTCACATTTTGAAAAGCAATTAATCGAAACGCAGAAGATGGAGATGACGTCACCTTCTTCTTCATCGAAA GCGTTATCAATAACACCAGGTTGTAGGGTTTTGAGTGATCAACATATATGGAAGCGACTCCAAGATGCTGGATTCGATGAGGAATCGATTAAGCTCAAAG ACAAAGCTGCTCTTGTTTCCTACATCTCTAACCTCGAAGCTCAGATATATGACCACCAGCACCACATGGGCCTTCTCATATTGGAGAAAAGGGAATTGAC TTCCAAGTATGAGCAAGTTAAGGCCTTGTCTGAATCATCTGAGCTAATGCAGAAACATGATTCAGCCATGAACAAATCTTCATTAACTGAAGCAAAGAAA CGGGAAGAAAGTTTGAAGAAGACAGTGGGGGTCAAAGAAGCATGTATTGCAAGTCTTGAGAGGGCCTTGAATGAGATGCGCTCTGAATGTGCTGAAACAA AATTTGCAGCTGAGAGTAAACTTGCTGAAGCACATCAATTGATTGATGAAGCACATAAAAAATTTACAGAGGCTGAGGCTAGGGTGCATGCAGCAGAATC TTTGCAAGCAGAGGCTAACCGATATAACAGTATTGCGGAAAGGAAGCTTCACGATGTTGAAGCACGTGAAGATAACCTCAGGCGGAAGATCATGTCTTTC AAGTCAGATTGTGATGAAAAGGACAAGGAGATTATTCTGGAATTGCAATCTCTTTCTGAAAGGCAAAAAGGTTTACAGCAAGAACAGGAAAGGTTACTTC AGTCTCAAGCCCTGCTCAATCAGAGAGAGGATCTTCTTTTTAGTAGATCTCAGGAACTAAATCGTCTTGAAAAGGAGTTAGAAGACACAAAAGTGAAAAT TGAAAAGGAACTTGATGCCCAGCATTATGAGAAAACCAATCTGAAAGTGACTGAAGCCACCCTAACACAAAAACAAGAGGCACTCACTAAACGGGAAGCT GAGCTGAACAAGAAAGAGAAAGAGTTGCTTGAGTTTCAAGTGAAACTTGCTTGTAGAGAATCTGATGAAATTCACAAAGTTATAAATGACCAGGAAGCTG CATTGAGGACTAGAAAATATGATTTGGAAGCTGAGTTACAAATGCAGCGCAAACTGGTTGAAAATGAAATTGAGACAAAAAGACGAGCTTGGGAGTTGAA GGAGGTTGATCTTAAACAACGGGAGGATCAAATCCTGGAAAGGGAGCATGAGTTGGATGTCCTGTCAAGGTCACTGACTGAGAAGGAGAAGGATCTGGTG GATATATCAAGTGCTCTCGAAGAAAAAGAACAAAGATTGAGAGCTGCTGAGGAGGAGCTTGAGTTAAATAAATCCCTTTTGCAAAAGGAGAAAGATGAGA TTGAACAAACAAAACAAGATCTGCAGAAGTCTATGTTATCTTTGGAGAATAAACTACAGATAGTTGATAATGCAAAGGAGAAACTGGAGACCATGAAAAG TGAAACAGGTGACCTGTCAATTTTAGAAGTGAAGCTAAAGGAAGAGATTGACCTTGTAAGGTCTCAGAAGCTGGAGCTTTTGGCCGAAGCAGATAAGCTA GAAGCCGAAAAGGCAAAGTTTGAAGCTGAGTGGGAACTTCTTGACGAAAAAAAGGAAGAGTTGCAGAAAGAAGCAGAACTCATAGCAGAGGAAAGGAATG CAATATCCATTTTTATGAAGAATGAGCGTGATAGGCTTAGAGAAGAGAAGGAAAATGTGCGTAATCAATACACCCAAGACATGGAGTTGCTTGCCAGCGA ACGAGAAAAGTTCATGAACAAGATGGCCCATGAACATTCTGAGTGGTTTGGCAAGATGCAGCAAGAGCGAGCAGATTTCTTGCGGGACATTGAGATACAA AAGAGGGAGTTAAATAACCTTGTTGACAAGAGGCGTGAAGAAGTGGAAAGTTATTTGAAGGAAAGTGAAAAGGCTTTTGAGGAAGAAAAGAACAATGAAC TTCAATATATCAATGCCCTTAAGGAAAAAGCAGAGAAAGAGTTGGAACAGGTTTCCTCTGAGATGGAAAGGCTTCAAACTGAGCGGTCAGAGATAAATTT GGACCGTGAACAGAGAAATAAGGAATGGGCTGAAATAACTAAGTGCATTGAGGAACTTGAAGTTCAAAGGGATAAGCTACAAAAACAGAGAGAACTTTTG CATGCGGATAGAATCAAAATTCATGCTCAGACTGAAGAATTGAAAAAGTTAGAGGATTTGAAAGTTGTCTCAGATGACATTGCTATCACTAGAATGCTTA AATCTGATATGGAGTCTAACCAACAAAAAATCTCTGCTTGGAGAAACTTGAAGCATCAGACTTTTACACATGGTGGTTGCCTGAATGCATGTGAGGAAAT AGATGCAGGTAACATGGGAAATGGTTTTGGTACTCCTTTTGTGCAGAAGTCATCCAGTCTTTCTCCTCCTAGTCCTGTTCGATTCTCATGGATCAAACGA TGCACAGAACTAATATTCAGAAATTCTCCTGAGAAGCTACTCATGGAAAAAGATGATTTGCATTTGGTTTCTGGTACTGGTAACATTAGCAATGGGCAAA AGCACTTGGAAAATGACAAACTTTCACTTGGGGAACCAAAAGTAATAGTTGAAGTACCGGCTCGAAATGAAGATGTCAGCAGAACAAGCGAGTTCGAATC TGAGACTAAAAATGCGAATGGAGCAAGTGCACTCTCGTATACGTATGAACATCAAGTGGGGATACGGAAAAGAGGAAGTGAGAACATTAGTAATGAAGTT GGTGATCCACGTATAGATCTGGGCCAGAATAAGAAACAGAGAGCAGAAGGGCAAACCACCAAAAAACTGTTGGATACAACAGAGACCCAGCATTTATTGA TGACATCAAATCAAACACAAGGGAGCATTGAAGAAACTCACGAAGTAATAGTGGATAAGGTTATTCATCTATCAGAAGTGACTTCAGAGAAATTTGATGC TCTCACTTCCACTATGCCTAATCAAGAGCTGAGAGATAATTTGCAGAATGCTACACTAAGAGTGGATAAGCTTCATGGAGAAACAAATGATCAATCTAAT TCTAAAACTATTCAGGAAAATATTTTACCATGTGGCTCCGAAGTAGATGGAAAAAAAGAGGAAACATGCAAAGAAAATAATGGACATGTTCCGGAGCAGT GTTAGGTAGTTAGGTCTTAAAAACTTATACTGCTTCCTTTTGTTTCTTTTATTTGTTACGTTCCGATATCAGATGCTTATGCAGGTAGTGTTTGGCTATA AACAGGGACTGCGGTTGGTATATGATGATTAGTGTGTTTGGTTAAAGTGTATATTAGGAGTGAATGAGGTGTGTCTATACTATACTTAAACATATCTAGT TTTGCATTCTTCTCATTGATATCTCTCTTGTTCACCTAACAGATAATATAGTTGCATTTTTAAATATATTATGTTGATTTGATTTGTTCTCCTCTTGCAT TGCAGGATCCTAACACAGTTTGGAGGGACTGTTCCTTTGTAAAGTTGATTGATTGATTACTTGGAGATGTCTGCTGTGCTGTGTGTACACATTCATTATA TGGATGCATTTGCAAAATAGTGAGGTAGTGAATGTTCTGTTCATATAATAGGGTTCATAAAATAGGTATGTTTTGTACTCCGAGAGGAGTCACTAAAAAA AGGAGATAAATGGTATGTGCTTTTTAGCTTTTGTAAAATCTGGCAGTGTTTGCTAGCAAAACTTTGCAAAGTTGGTTTTCTGACTTAGTGGTTTTTCTTT AATTTGTGACATTGATGGTTCATCATTATTAGTGCTATTGAGATGTTTGTGTTAAAAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_142319; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_281167
| Blastp | Protein CROWDED NUCLEI 4 from Arabidopsis with 46.77% of identity |
|---|---|
| Blastx | Protein CROWDED NUCLEI 4 from Arabidopsis with 46.53% of identity |
| Eggnog | nuclear matrix constituent protein 1-like(ENOG410YA8H) |
| Kegg | Link to kegg annotations (AT5G65770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421667.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |