Ll_transcript_281172

• Id Trinity: TRINITY_DN46115_c3_g4_i2
• Name Transcript: Ll_transcript_281172
• Sequence: GTTAGTCACATTTCATTATTAATATATCGAGAGTGAAGAAACACAATCGGAAAATCCTAAATAAAGTGCTTTTCTTTTTTTCATTCTATTGATAAAAAAC CTAAACTCAACTCAGCACAACACAACACAACTCACATTTTGAAAAGCAATTAATCGAAACGCAGAAGATGGAGATGACGTCACCTTCTTCTTCATCGAAA GCGTTATCAATAACACCAGGTTGTAGGGTTTTGAGTGATCAACATATATGGAAGCGACTCCAAGATGCTGGATTCGATGAGGAATCGATTAAGCTCAAAG ACAAAGCTGCTCTTGTTTCCTACATCTCTAACCTCGAAGCTCAGATATATGACCACCAGCACCACATGGGCCTTCTCATATTGGAGAAAAGGGAATTGAC TTCCAAGTATGAGCAAGTTAAGGCCTTGTCTGAATCATCTGAGCTAATGCAGAAACATGATTCAGCCATGAACAAATCTTCATTAACTGAAGCAAAGAAA CGGGAAGAAAGTTTGAAGAAGACAGTGGGGGTCAAAGAAGCATGTATTGCAAGTCTTGAGAGGGCCTTGAATGAGATGCGCTCTGAATGTGCTGAAACAA AATTTGCAGCTGAGAGTAAACTTGCTGAAGCACATCAATTGATTGATGAAGCACATAAAAAATTTACAGAGGCTGAGGCTAGGGTGCATGCAGCAGAATC TTTGCAAGCAGAGGCTAACCGATATAACAGTATTGCGGAAAGGAAGCTTCACGATGTTGAAGCACGTGAAGATAACCTCAGGCGGAAGATCATGTCTTTC AAGTCAGATTGTGATGAAAAGGACAAGGAGATTATTCTGGAATTGCAATCTCTTTCTGAAAGGCAAAAAGGTTTACAGCAAGAACAGGAAAGGTTACTTC AGTCTCAAGCCCTGCTCAATCAGAGAGAGGATCTTCTTTTTAGTAGATCTCAGGAACTAAATCGTCTTGAAAAGGAGTTAGAAGACACAAAAGTGAAAAT TGAAAAGGAACTTGATGCCCAGCATTATGAGAAAACCAATCTGAAAGTGACTGAAGCCACCCTAACACAAAAACAAGAGGCACTCACTAAACGGGAAGCT GAGCTGAACAAGAAAGAGAAAGAGTTGCTTGAGTTTCAAGTGAAACTTGCTTGTAGAGAATCTGATGAAATTCACAAAGTTATAAATGACCAGGAAGCTG CATTGAGGACTAGAAAATATGATTTGGAAGCTGAGTTACAAATGCAGCGCAAACTGGTTGAAAATGAAATTGAGACAAAAAGACGAGCTTGGGAGTTGAA GGAGGTTGATCTTAAACAACGGGAGGATCAAATCCTGGAAAGGGAGCATGAGTTGGATGTCCTGTCAAGGTCACTGACTGAGAAGGAGAAGGATCTGGTG GATATATCAAGTGCTCTCGAAGAAAAAGAACAAAGATTGAGAGCTGCTGAGGAGGAGCTTGAGTTAAATAAATCCCTTTTGCAAAAGGAGAAAGATGAGA TTGAACAAACAAAACAAGATCTGCAGAAGTCTATGTTATCTTTGGAGAATAAACTACAGATAGTTGATAATGCAAAGGAGAAACTGGAGACCATGAAAAG TGAAACAGGTGACCTGTCAATTTTAGAAGTGAAGCTAAAGGAAGAGATTGACCTTGTAAGGTCTCAGAAGCTGGAGCTTTTGGCCGAAGCAGATAAGCTA GAAGCCGAAAAGGCAAAGTTTGAAGCTGAGTGGGAACTTCTTGACGAAAAAAAGGAAGAGTTGCAGAAAGAAGCAGAACTCATAGCAGAGGAAAGGAATG CAATATCCATTTTTATGAAGAATGAGCGTGATAGGCTTAGAGAAGAGAAGGAAAATGTGCGTAATCAATACACCCAAGACATGGAGTTGCTTGCCAGCGA ACGAGAAAAGTTCATGAACAAGATGGCCCATGAACATTCTGAGTGGTTTGGCAAGATGCAGCAAGAGCGAGCAGATTTCTTGCGGGACATTGAGATACAA AAGAGGGAGTTAAATAACCTTGTTGACAAGAGGCGTGAAGAAGTGGAAAGTTATTTGAAGGAAAGTGAAAAGGCTTTTGAGGAAGAAAAGAACAATGAAC TTCAATATATCAATGCCCTTAAGGAAAAAGCAGAGAAAGAGTTGGAACAGGTTTCCTCTGAGATGGAAAGGCTTCAAACTGAGCGGTCAGAGATAAATTT GGACCGTGAACAGAGAAATAAGGAATGGGCTGAAATAACTAAGTGCATTGAGGAACTTGAAGTTCAAAGGGATAAGCTACAAAAACAGAGAGAACTTTTG CATGCGGATAGAATCAAAATTCATGCTCAGACTGAAGAATTGAAAAAGTTAGAGGATTTGAAAGTTGTCTCAGATGACATTGCTATCACTAGAATGCTTA AATCTGATATGGAGTCTAACCAACAAAAAATCTCTGCTTGGAGAAACTTGAAGCATCAGACTTTTACACATGGTGGTTGCCTGAATGCATGTGAGGAAAT AGATGCAGGTAACATGGGAAATGGTTTTGGTACTCCTTTTGTGCAGAAGTCATCCAGTCTTTCTCCTCCTAGTCCTGTTCGATTCTCATGGATCAAACGA TGCACAGAACTAATATTCAGAAATTCTCCTGAGAAGCTACTCATGGAAAAAGATGATTTGCATTTGGTTTCTGGTACTGGTAACATTAGCAATGGGCAAA AGCACTTGGAAAATGACAAACTTTCACTTGGGGAACCAAAAGTAATAGTTGAAGTACCGGCTCGAAATGAAGATGTCAGCAGAACAAGCGAGTTCGAATC TGAGACTAAAAATGCGAATGGAGCAAGTGCACTCTCGTATACGTATGAACATCAAGTGGGGATACGGAAAAGAGGAAGTGAGAACATTAGTAATGAAGTT GGTGATCCACGTATAGATCTGGGCCAGAATAAGAAACAGAGAGCAGAAGGGCAAACCACCAAAAAACTGTTGGATACAACAGAGACCCAGCATTTATTGA TGACATCAAATCAAACACAAGGGAGCATTGAAGAAACTCACGAAGTAATAGTGGATAAGGTTATTCATCTATCAGAAGTGACTTCAGAGAAATTTGATGC TCTCACTTCCACTATGCCTAATCAAGAGCTGAGAGATAATTTGCAGAATGCTACACTAAGAGTGGATAAGCTTCATGGAGAAACAAATGATCAATCTAAT TCTAAAACTATTCAGGAAAATATTTTACCATGTGGCTCCGAAGTAGATGGAAAAAAAGAGGAAACATGCAAAGAAAATAATGGACATGTTCCGGAGCAGT GTTAGGATCCTAACACAGTTTGGAGGGACTGTTCCTTTGTAAAGTTGATTGATTGATTACTTGGAGATGTCTGCTGTGCTGTGTGTACACATTCATTATA TGGATGCATTTGCAAAATAGTGAGGTAGTGAATGTTCTGTTCATATAATAGGGTTCATAAAATAGGTATGTTTTGTACTCCGAGAGGAGTCACTAAAAAA AGGAGATAAATGGTATGTGCTTTTTAGCTTTTGTAAAATCTGGCAGTGTTTGCTAGCAAAACTTTGCAAAGTTGGTTTTCTGACTTAGTGGTTTTTCTTT AATTTGTGACATTGATGGTTCATCATTATTAGTGCTATTGAGATGTTTGTGTTAAAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_142319;
• Additional information: details;

Expression of Ll_transcript_281172

FPKM

• PAB: 0.1
• PNAB: 3.4
• PS1: 3.5
• PS2: 2.9
• PS3: 3.6
• PW1: 3.3
• PW2: 2.1
• PW3: 2.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281172

• Blastp: Protein CROWDED NUCLEI 4 from Arabidopsis with 46.77% of identity
• Blastx: Protein CROWDED NUCLEI 4 from Arabidopsis with 46.53% of identity
• Eggnog: nuclear matrix constituent protein 1-like(ENOG410YA8H)
• Kegg: Link to kegg annotations (AT5G65770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421667.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;