Ll_transcript_281179

• Id Trinity: TRINITY_DN46115_c3_g8_i2
• Name Transcript: Ll_transcript_281179
• Sequence: CTTCATCCATAATAGTATGCACAATTCTCTTTGTTCGTAATTTTTGTGTGTGAATATTTTGTTTCTTTTTTTTAGCGATGGAAGCTAGTGTAAAGGAAGA GTTATCGGAGATTCCAATTTCGAATGCGCGAGAGCGGAAGGAGAGAAACGGCGTCGTTTCATCTCCTCCTCCTGGCGGGTTAATTGAACTCAGTAGCGAT TCCGACTCAGATTCCGATGTTGATGTTTTGGGCGAGAATTCTTCGAAAAAGCGTAAGACAAACGATGTGGGAGTCGTTTTGCCCATTGGATTCCTCAGTC CTCTCCCTCCGGCCACCGCGCTGCCGTCGTCTCAGGCTATGCTGTCATTACCTGCACCTAACTCGGTTTCTGCTTTGGTGCGGTCTGATGGGATTGCGAC CTTTGCGTCGCAATCGAATGGTTGCAAGCAATTTTGGAAGGCTGGTGATTTTGATGGACCTCCTGCAAGTGCCTTTGAATCTTCAACCATTGGTATGGAT CATGTCAGAGTTCACCCTAAATTTCTACACTCTAATGCCACAAGTCATAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATTCATTGGACGAGG TTTGTAATGGGGCAACATATGTCAATGTAGATAGGGTTGTAAGTAAGAAAGATGGTACAAGGATGTTGCTGATCGAAGATAACGGTGGTGGGATGGATCC TGATAAAATGCGTCAATGCATGTCGTTGGGGTATTCTGAAAAAAGCAAATTGGCAAATACAATTGGACAATATGGAAATGGCTTCAAAACAAGTACCATG AGGCTTGGGGCTGATGTAATTGTATTCTCCCGTTCGCAAGGGAAAGATGGGAAGAGCTCTACACAAAGCATTGGCTTGCTGTCATACACATTTTTGAGGA ATACAGGGAAGGAAGACATTGTGGTACCCATGCTGGACTATGAAGGAGGAGGAATTGAATGGAATAGGATTGTAAGAACTTCAACTGATGACTGGAACAA AAATGTTGATACAATAGTTCAATGGTCACCATTTTATGATGAAGCTGATCTTCTTCGTCAGTTCAACCTGATGAAAGATCATGGCACACGAGTAATTATA TACAATCTTTGGGAGGATGACCAAGGCCAACTGGAACTTGATTTTGATACAGATCCACATGATATTCAAATCAGAGGCGTAAATCGAGATGAGAAAAACA TACAGATGGCTAAAGAGTTTCCCAATTCTCGACACTTCCTAACTTATCGACATTCACTAAGGAGTTATGCCTCAATTTTATATCTGCGGCTTCCTCCTGG CTTTCGGATTATTCTTCGTGGCAAGGATATTGTTCATCATAACATAGTGAATGACATGATGATGTCTCAGGAGGTGACATACAGGCCACAATCTGCAGCG GATGGGTTTCCGAAGGATTCAAATATGGTTGCTGTTGTTACTATTGGATTTGTCAAGGATGCAGTTCATCATATTGATGTTTCAGGGTTCAATGTTTATC ATAAAAATCGACTTATTAAGCCATTCTGGAGAATTTGGAATCCAGCAGGAAGTGGTGGGCGTGGGGTCATAGGTGTGTTGGAAGCCAATTTTGTAGAGCC TGCTCATGATAAGCAGGGCTTTGAGCGTACATTAGTTTTATCAAGACTGGAATCAAAATTGATACAAATGCAGAAGAATTATTGGGGATCTAACTGCGAT AGAATTGGTTATGCCTCCAATAGAAAGAAAAAACAAGGGAGAGAATCTGTTGATAGAGAGACATCTCCCGAACATGTCCCTGAATCATCTCGATTAAAAA GGCAACATTCTGCCCCAAATGACAAGGGAACACCACTTCCATCAGACAAGATGTATTTACAGCCCAATCAGAGACGGATACGAAAAGAATCAGAGAAATA TACTGCATACATGAATGGTCGTGCATCAGCCTCTCCCAACAGTAGGATACCAAGTTCATCTGAACAATCATCATCTGCTGAGGATGTCAGTGATCAAGAT GATGTTGTCTTACCTAAGAATCAAGCAAAGGGCAGTAGTCAAAAGATTTCCCATGCTGAAAAGTCATTTGAAAATGAAAATTTACGTTTGAAAGATACTA CTACACCAAGTGGAAAAACCTTACAGTCCACACGGGCATCCAAGCTAAAGGGACGAGATGTTTGTGATGGTGAACAAGTACTACCCGATTGTGATCTGCT TACTATGCAGCAGTTGAAAGAAGAGAATTGTGAGTTGAAGAAAAGGTTAGAGAGGAAGGAGGATGAAATTTTAGTGGATGCAATGCAGGCTCTCCAGCAT GAGAAAGACCGGTGTAAATCTCTCGAAACACAGCTCCATGCTGCAGAAAAAAAGATTGAAGAATTGAACAAGGAACAAGAAGCTCTAATTGATGTCTTCT CTGAAGAAAGGGATCGGCGAGATGCTGAGGAGAAAGTTTTGAGAAAGAAGCTTCAGGATGCATCAAATACCATTCAAGAGCTGCTTGACAAGGTAAGGAG ACTTGAAAGGAAGTCTAGTGTTGCCAAACCAGGTCGATGAAAGCCTTTTTACTGCATATTCTAATTGGTGCATCTTTGGGGAGCTTATATTTTTCTTGGT AGTCTGGTTTGACCTTTTTAGGAACTTCCTAACTTGAGATATATGATGTGGGAGCATTTCTTGTGTATAGTTTCTTGTCCAACATAGAGGGGCTACTTAT GACTTGGTTTAATTCTTTCTTCATCATGGTATTCAATCATTTTTACTTTCTAGTTACCCAAAACCGTTTATATGGTAAAATTGATTAAAGCACCTGAAAT ATAAAACAAGTAGGA
• Tissue: pods
• Gene name: LI_gene_142323;
• Additional information: details;

Expression of Ll_transcript_281179

FPKM

• PAB: 0.1
• PNAB: 3.4
• PS1: 2.2
• PS2: 1.4
• PS3: 3.5
• PW1: 4.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281179

• Blastp: Protein MICRORCHIDIA 4 from Arabidopsis with 54.76% of identity
• Blastx: Protein MICRORCHIDIA 7 from Arabidopsis with 67.15% of identity
• Eggnog: MORC family CW-type zinc finger(ENOG411033B)
• Kegg: Link to kegg annotations (AT5G50780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463397.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF13589.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;