| Id Trinity | TRINITY_DN46115_c3_g8_i8 |
|---|---|
| Name Transcript | Ll_transcript_281192 |
| Sequence | GGGATAGGTGCTCGCTAGAAATAGAAACCCCTTCTTTTCTTTTCTGACCTGACCCTTTTTGTTAACTCCTCAGCTTCTTTTCCCTTGTCCTAGTAAACAA AGAAAAAGAATTTTATTAAAATCAACCAAGCCCTAGCAAATTGAATTCTAGTCAGCGATGGAAGCTAGTGTAAAGGAAGAGTTATCGGAGATTCCAATTT CGAATGCGCGAGAGCGGAAGGAGAGAAACGGCGTCGTTTCATCTCCTCCTCCTGGCGGGTTAATTGAACTCAGTAGCGATTCCGACTCAGATTCCGATGT TGATGTTTTGGGCGAGAATTCTTCGAAAAAGCGTAAGACAAACGATGTGGGAGTCGTTTTGCCCATTGGATTCCTCAGTCCTCTCCCTCCGGCCACCGCG CTGCCGTCGTCTCAGGCTATGCTGTCATTACCTGCACCTAACTCGGTTTCTGCTTTGGTGCGGTCTGATGGGATTGCGACCTTTGCGTCGCAATCGAATG GTTGCAAGCAATTTTGGAAGGCTGGTGATTTTGATGGACCTCCTGCAAGTGCCTTTGAATCTTCAACCATTGGTATGGATCATGTCAGAGTTCACCCTAA ATTTCTACACTCTAATGCCACAAGTCATAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATTCATTGGACGAGGTTTGTAATGGGGCAACATAT GTCAATGTAGATAGGGTTGTAAGTAAGAAAGATGGTACAAGGATGTTGCTGATCGAAGATAACGGTGGTGGGATGGATCCTGATAAAATGCGTCAATGCA TGTCGTTGGGGTATTCTGAAAAAAGCAAATTGGCAAATACAATTGGACAATATGGAAATGGCTTCAAAACAAGTACCATGAGGCTTGGGGCTGATGTAAT TGTATTCTCCCGTTCGCAAGGGAAAGATGGGAAGAGGTTTGCTTGATTTTCTTATTGTTTCATTTTTTCTACCTGGGTTTAGGTTTGATTTTTTGTTTCT GCATTAAGAAACTTGAGTTCTGAAGTAGTTATTTTGGTATTTGTTACCTTTCTTCGGGCAATCATGACAACCTAGTTAGGTCACATGTGTTTGTTGTAGT TAAATGCATGTGCATAAGGGTAAAGTATTCCAACAATTTATCATTAGTATTGGAATATTATGTTACCTAGAGATTGCAGGTTTAAATAGTGTTTTGTTTT TATCTGTAAGTGAAGATTATATGAAGTAATTCTCCATCTACAGTATTTACAAGCTAAACGAACTCTGAACAACTTTCAATTGTGAATGTTGGTGGAATAT ATCATCTGCAAAAAAAGCATGCATATCATGGCTTCAACTTTAGTTATGCTAAGTAAGCACATCCAAGAGCGGGATAAAAAGATAGGGACTCAAAGTTGAT CTTTGGTGCACTCCTGTAGTTATAGGAATCTTCTTTGGTACCACTGGTCAGGACCCATCATATCTTTGATTTCTCAAATTTAGTCTATACAAGCTCCATC TTATCTAGAGTCTTCCTCTTCCACAATACTTCTCTTGGCATTATATAATATGCCTTTTCCAAATCTATGAAAACCAAGTAAAGTCCTATTTTATTTTCTT GATGTCTCTCCATCAAACTTTATAGCAACTATATTGCTTACATGGTCGATTCCCCAGTATAAAACCAAATTGATTCTCCTTAACATGATTCCCTTGTCTT AATCTCCACTCAATTACCCTATTCTATAGCTTCAAAGTATGGCTCATGAGTCATGAGTTTAATCCCTCCATAATTTACGCAATTTTGTGTGTCTTCCCCA TTTTAGAATATGGATTGAAGTAATTCTCTTGTCATCCAACATTGTTTTAGATCTCATAATCGATAATATTTTTGTAAGCCAAATTGTGATTGTCTCTTCT AGATCTTTCCATACCTTGATGGGTATATCATCCAACCGACTAGCTTTGCCATAATCCACCCTCATGAATGCTTAGTTTATCTTAGACTTGGTAATTTTGC AATAAAACCTGTATTTTTTGTTAACATCTAGTGTTTAGCCTGCAGTAAAATTGTGTATTCTTCATTAAATAGCTTGTGTAACTTCCATCTTTCTTTTACT TCTTGTTTCATGTCTAGGACTGAATCTCTACATCCTGAATGAATTTCACTTGGTTAAAGTCTCTTGTTTTTATTTTATAATTATTTCTTCCCCAACTCTA GGATAATATCCAACTATTTTTGATATATATATATATATATATATATTTAGATAGAGAGAAATACATGTATAAATGTGCAAAAAAATAATCAACATTCCAT AATTTTAAAGTGAGAACATAATTCTTAGACCTTACTAAGTACAAAATAGAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_142323; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_281192
| Blastp | Protein MICRORCHIDIA 4 from Arabidopsis with 55.34% of identity |
|---|---|
| Blastx | Protein MICRORCHIDIA 7 from Arabidopsis with 75.31% of identity |
| Eggnog | MORC family CW-type zinc finger(ENOG411033B) |
| Kegg | Link to kegg annotations (AT5G50780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463397.1) |
| Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF13589.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |