| Id Trinity | TRINITY_DN46130_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_282830 |
| Sequence | GAAGAAAAAAAGAAAAGAAAATGCTATTTTGGAAAGAGAAAGGAAAAAGGCAACATTCACACGCTACCTCGTTTTTTCACCAGTAGATTCATTTTAGATA TTTTTAATCAAAGCCAGGAAAAAAAACATAAAGTGAAAATAAGTAACTCTTCATTCAACTTAGAAAATCTCCATTTGAAAAAAACCATACACCAGAGGAG TATCGTGGATTGGGAAGCATAAGTTTTGTTCAGAATTTGCAAAGTCAAAATTTCGGTAACTATGGCAACTTCATGGGCTGATTCTGCTGACCATTCAGCC AATGTCTCTGCACGGCCCGCTTATCTCCCTCCGCATCTTCGCAACCGGACATTGTCTTCAGAACCCCCAGCTGCTGCAACATCCTACTTGTCTTCATTGG GGGGTAGTGATCGTGCGAATTATGGCGGTCTGGCTGCTGGTTTTCATGGGGGTATTTCCTCTAAACCTGATCTCAGGCTCCAGGGATACGGTTCTAATGT TCAGAATGGCGGCGGTGGTGGCGGCTGGAATGGTAGAGGGGCAGGGATGGACCGTGGAAGGCGTGAGGTTAACCCTTTTCAGAATGATGAACCTGTGGAT CAATTTTCTCATGAGCAAGAAAACACGGGGATTAACTTTGATGCTTATGATGATATCCCTGTGGAGACTAGTGGGGGTAATGTGCCTCCACCTGTAAATA CATTTGCGGAAATAGACTTGGGTGAGGCGTTGAATCAAAACATACAAAGGTGCAAGTATGTCAAACCAACTCCGGTTCAGAGGTATGCCATACCGATTTC TCTCGCGGGGAGAGATTTGATGGCATGTGCTCAGACAGGGTCTGGAAAGACAGCTGCCTTTTGCTTTCCTATTATAAGTGGAATCATGAGGGAGCAATGT GTTCAAAGACCACGTGTAGCACGAACTGCTTTCCCTATGGCTCTTATCCTCTCCCCTACTCGGGAGCTTTCATGCCAGATACATGATGAGGCCAAAAAGT TTTCTTATCAAACTGGTGTAAAGGTGGTAGTTGCTTATGGAGGAGCACCAATCAACCAACAGTTGCGGGAGCTGGAAAGAGGAGTTGATATTCTGGTAGC AACACCGGGACGATTGGTGGATTTGCTTGAGAGGGCTAGGGTGTCACTGCAAATGATAAGATATTTGGCTCTTGATGAGGCAGATCGGATGTTGGATATG GGTTTTGAGCCTCAAATAAGAAAGATAGTTGAACAGATGGACATGCCTCCTCCTGGCATGAGACAGACTTTGCTGTTCAGTGCCACATTTCCCAAAGAGA TACAGGGACTTGCATCGGATTTTCTTTCAAACTACGTGTTTCTGGCCGTTGGAAGGGTCGGTTCAAGTACTGATCTAATTGTTCAAAGAGTAGAATATGT GCTTGAGTCAGACAAGAGAAGCCACCTCATGGACCTTCTCCATGCTCAGAGGGAAAATGGAGTTCATGGAAAGCAAAGTCTGACATTAGTTTTTGTGGAA ACAAAGAAAGGAGCTGATGCATTGGAGCACTGCTTGTGTGTTAATGGATTTCCTGCAACTAGCATTCATGGTGATAGATCACAACAAGAAAGAGAACTAG CATTGAGGTCATTTAAGAGTGGAAACACGCCAATTTTAGTAGCCACAGACGTTGCTGCACGTGGCCTTGACATTCCACGGGTAGCACATGTGGTAAACTT TGATCTTCCCAATGACATAGATGATTACGTGCATCGGATAGGAAGAACCGGACGAGCTGGGAAAATGGGATTAGCAACAGCCTTCTTCAATGAGAGTAAT TTATCCATGGCTAAACCGTTGTCTGATCTGATGCAAGAGGCAAATCAAGAAGTACCTGCTTGGCTCACACGTTATGCAGCGAGGTCATCTTATGGTGGCG GCAACAGAAACAGGCGGTCTGGGGGAGCCCGTTTCGGTGGCCGTGATTTTCGGAAGGAGGGCTCCTTTAATAAAGGAGGAGATTACTACGGTGGAACAGG TGGGTATGGGGTTCCAGGCAATTATGGTGGAGGGTATGGTCAAGGTGTGACCAGTGCTTGGGATTAGATTATTGTCCCAAGGCTAATTCATGATTTCATT CTCATGTTTGAAGTGTATATAAACATTCTGTAGACAACCTGAAATTTTCTGACTAGATTTAGTGGTGTGACCTAAAGGAGAGGATGTAAACAGATTTGAT GGAAGACCAAAGGGTAGGTGCTATTGTTTATTAAGTTTGTACTATGCTATGCTAGTTTATCTGATATTTTATCATAGAACTTGTCCAACTCTAAGAGATG TCCTAAAAGTTGGATCAAAACTAAAAAAAAAAATGAAAACTTAAGGATTTGACCTATTTAAGGATTTGACCTATTTAAGGGTTTGACCTCTCTAAGGATT AGGTATAGGGATTAAAAAAGTGTGCTGGGAATATGGGATTGAAATCTTATTTAAGTCCTTTAAAATTAATAAAATAGTAAACATTATAGTGTTAATTTCC CAATAAAGACTTATGCTATTTATAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_142410; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_282830
| Blastp | DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.76% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.93% of identity |
| Eggnog | purine NTP-dependent helicase activity(ENOG410XNTI) |
| Kegg | Link to kegg annotations (AT2G42520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428608.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |