Ll_transcript_282825

• Id Trinity: TRINITY_DN46130_c1_g1_i8
• Name Transcript: Ll_transcript_282825
• Sequence: GAAACATTTTTTGGTACAAAAAATATTGGGAAGAATAAGCCCATATCAAGAATCAACGGATGTAAGAAAGAGGGAGGAAACGTAGAAGAAAAAAAGAAAA GAAAATGCTATTTTGGAAAGAGAAAGGAAAAAGGCAACATTCACACGCTACCTCGTTTTTCGCCGGTAGATTCATTTTAGATATTTTGAATCAATCAAAT TTGTGTTTGGTAACAAGTAAAACACATTTAACCACTGAAACTCTTTTGATTCAACTTTGATAACTCCGTTAAATTCTCCATTTCTTCATATTTTACCGTT TTCTTCCTTAAATCTCTTTCTTTTCACTTTCTCTCTCTCACCCCTCATTCATATAGTTCAAATTTTGAATTTTCTCTGCTTATCACGCCATAAGAGGATT GTGGATTGGGACGCATAATTTTGTTTCAGCATTTGTTTGTTATTATCAGCAAAGTCAAAATTTCTGCAACAATGACAACTTCATGGGCGGATTCTGTTGA CAATTCAGCCAAAGCCTCAGTGCGCCCTACCCGATCGGCGTATGTTCCTCCACATCTTCGCAACCAGAAATTGTCTTCGGAACCCCCAGCTGTGGCAGCA TCATACTCGTCTTCAGCAGCAGCTAGTGATCATGTGAGTTACGGTGGTCCGGCTGCTGGTTCTCATGGGGGTATATCGTCTAAGCCTGATTTCGGGCGCC AGGGATATGGTTCTAATGCTCAGATTGGTGGTGGTAGTGGTGGTGGTGGCTGGAATGCTAGAGGGATAGCGAGGGACCGTGGGAGGCGTGAGGTGAACCC TTTCGAGAAAGATGAACCTGTGGATCAATCTCTTGATGAGCAAGAGAACACAGGCATTAACTTTGATGCTTATGATGATATCCCTGTGGAGACTAGTGGG GATAATGTGCCTCCACCGGTAAATACGTTCGCAGAAATAGATTTGGGTGAGGCGTTGAACCAAAACTTACAGAGGTGCAAGTATGTCAAACCAACTCCGG TTCAGAGGTATGCCATACCGATTTCTCTCGCCGGGAGAGATTTGGTGGCCTGTGCTCAGACAGGGTCTGGAAAGACAGCTGCCTTTTGCTTTCCTATTAT AAGTGGAATAATGAGGGAACAGTATGCTCAAAGACCACGTGTAGCACGGACTGCTTTCCCTATGGCTCTTATCCTCGCCCCTACTCGGGAGCTTTCTTGC CAGATACATGATGAGGCCAAAAAGTTCTCTTATCAAACTGGTGTCAAAGTGGTAGTTGCTTATGGAGGAGCACCAATCAACCAACAGTTGCGGGAGCTTG AGAGGGGAGTTGATATTCTAGTGGCAACTCCTGGACGATTGGTGGATTTGCTTGAGAGGGCTAGGGTCTCATTGCAGATGATAAGATATTTGGCACTTGA TGAGGCAGATCGGATGCTGGATATGGGTTTTGAGCCTCAAATAAGAAAGATAGTTGAACAGATGGACATGCCTCCTCCTGGCATGAGACAGACTTTGCTG TTCAGTGCCACATTTCCCAAAGAGATACAGGGACTTGCATCGGATTTTCTTTCAAACTACGTGTTTCTGGCCGTTGGAAGGGTCGGTTCAAGTACTGATC TAATTGTTCAAAGAGTAGAATATGTGCTTGAGTCAGACAAGAGAAGCCACCTCATGGACCTTCTCCATGCTCAGAGGGAAAATGGAGTTCATGGAAAGCA AAGTCTGACATTAGTTTTTGTGGAAACAAAGAAAGGAGCTGATGCATTGGAGCACTGCTTGTGTGTTAATGGATTTCCTGCAACTAGCATTCATGGTGAT AGATCACAACAAGAAAGAGAACTAGCATTGAGGTCATTTAAGAGTGGAAACACGCCAATTTTAGTAGCCACAGACGTTGCTGCACGTGGCCTTGACATTC CACGGGTAGCACATGTGGTAAACTTTGATCTTCCCAATGACATAGATGATTACGTGCATCGGATAGGAAGAACCGGACGAGCTGGGAAAATGGGATTAGC AACAGCCTTCTTCAATGAGAGTAATTTATCCATGGCTAAACCGTTGTCTGATCTGATGCAAGAGGCAAATCAAGAAGTACCTGCTTGGCTCACACGTTAT GCAGCGAGGTCATCTTATGGTGGCGGCAACAGAAACAGGCGGTCTGGGGGAGCCCGTTTCGGTGGCCGTGATTTTCGGAAGGAGGGCTCCTTTAATAAAG GAGGAGATTACTACGGTGGAACAGGTGGGTATGGGGTTCCAGGCAATTATGGTGGAGGGTATGGTCAAGGTGTGACCAGTGCTTGGGATTAGATTATTGT CCCAAGGCTAATTCATGATTTCATTCTCATGTTTGAAGTGTATATAAACATTCTGTAGACAACCTGAAATTTTCTGACTAGATTTAGTGGTGTGACCTAA AGGAGAGGATGTAAACAGATTTGATGGAAGACCAAAGGGTAGGTGCTATTGTTTATTAAGTTTGTACTATGCTATGCTAGTTTATCTGATATTTTATCAT AGAACTTGTCCAACTCTAAGAGATGTCCTAAAAGTTGGATCAAAACTAAAAAAAAAAATGAAAACTTAAGGATTTGACCTATTTAAGGATTTGACCTATT TAAGGGTTTGACCTCTCTAAGGATTAGGTATAGGGATTAAAAAAGTGTGCTGGGAATATGGGATTGAAATCTTATTTAAGTCCTTTAAAATTAATAAAAT AGTAAACATTATAGTGTTAATTTCCCAATAAAGACTTATGCTATTTATAAC
• Tissue: pods
• Gene name: LI_gene_142410;
• Additional information: details;

Expression of Ll_transcript_282825

FPKM

• PAB: 3.5
• PNAB: 1.4
• PS1: 4.7
• PS2: 2.2
• PS3: 5
• PW1: 1.8
• PW2: 2.5
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282825

• Blastp: DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.42% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.57% of identity
• Eggnog: purine NTP-dependent helicase activity(ENOG410XNTI)
• Kegg: Link to kegg annotations (AT2G42520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434483.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;