Ll_transcript_282827

• Id Trinity: TRINITY_DN46130_c1_g1_i9
• Name Transcript: Ll_transcript_282827
• Sequence: GAAGAAAAAAAGAAAAGAAAATGCTATTTTGGAAAGAGAAAGGAAAAAGGCAACATTCACACGCTACCTCGTTTTTTCACCAGTAGATTCATTTTAGATA TTTTTAATCAAAGCCAGGAAAAAAAACATAAAGTGAAAATAAGTAACTCTTCATTCAACTTAGAAAATCTCCATTTGAAAAAAACGTACGGATTTCTTCG CAAGAGTGTTCCTCAATCTTTTCAAAATTTTCTCTCATTTCCATTCATTTAGCATACACCAGAGGAGTATCGTGGATTGGGAAGCATAAGTTTTGTTCAG AATTTGCAAAGTCAAAATTTCGGTAACTATGGCAACTTCATGGGCTGATTCTGCTGACCATTCAGCCAATGTCTCTGCACGGCCCGCTTATCTCCCTCCG CATCTTCGCAACCGGACATTGTCTTCAGAACCCCCAGCTGCTGCAACATCCTACTTGTCTTCATTGGGGGGTAGTGATCGTGCGAATTATGGCGGTCTGG CTGCTGGTTTTCATGGGGGTATTTCCTCTAAACCTGATCTCAGGCTCCAGGGATACGGTTCTAATGTTCAGAATGGCGGCGGTGGTGGCGGCTGGAATGG TAGAGGGGCAGGGATGGACCGTGGAAGGCGTGAGGTTAACCCTTTTCAGAATGATGAACCTGTGGATCAATTTTCTCATGAGCAAGAAAACACGGGGATT AACTTTGATGCTTATGATGATATCCCTGTGGAGACTAGTGGGGGTAATGTGCCTCCACCTGTAAATACATTTGCGGAAATAGACTTGGGTGAGGCGTTGA ATCAAAACATACAAAGGTGCAAGTATGTCAAACCAACTCCGGTTCAGAGGTATGCCATACCGATTTCTCTCGCGGGGAGAGATTTGATGGCATGTGCTCA GACAGGGTCTGGAAAGACAGCTGCCTTTTGCTTTCCTATTATAAGTGGAATCATGAGGGAGCAATGTGTTCAAAGACCACGTGTAGCACGAACTGCTTTC CCTATGGCTCTTATCCTCTCCCCTACTCGGGAGCTTTCATGCCAGATACATGATGAGGCCAAAAAGTTTTCTTATCAAACTGGTGTAAAGGTGGTAGTTG CTTATGGAGGAGCACCAATCAACCAACAGTTGCGGGAGCTGGAAAGAGGAGTTGATATTCTGGTAGCAACACCGGGACGATTGGTGGATTTGCTTGAGAG GGCTAGGGTGTCACTGCAAATGATAAGATATTTGGCTCTTGATGAGGCAGATCGGATGTTGGATATGGGTTTTGAGCCTCAAATAAGAAAGATAGTTGAA CAGATGGACATGCCTCCTCCTGGCATGAGACAGACTTTGCTGTTCAGTGCCACATTTCCCAAAGAGATACAGGGACTTGCATCAGATTTTCTTTCAAATT ACGTGTTTCTGGCTGTTGGAAGGGTTGGTTCAAGTACTGATCTAATTTCTCAAAGAGTAGAATATGTGCTTGAGTCAGACAAGAGAAGCCACCTCATGGA CCTTCTCCATGCTCAGAGGGAAAATGAAACTAATGGCAAGCAATGCCTGACATTAGTTTTTGTGGAAACAAAGAAAGGAGCTGATGCATTGGAGCACTGC TTGTGTGTTAATGGATTTCCTGCAACTAGCATTCATGGTGACAGAACACAGCAAGAAAGAGAACTAGCATTGAGGTCATTCAAGAGTGGAAACACACCAA TTTTAGTGGCCACAGATGTTGCAGCACGTGGCCTTGATATTCCACGGGTAGCACACGTGGTAAATTTTGATCTTCCCAACGACATTGATGATTATGTGCA TCGGATAGGAAGAACAGGGAGAGCTGGGAAAATGGGATTAGCAACAGCCTTCTTCAATGACAGTAATTTGTCCATGGCCAAACCATTGGCTGATCTGATG CAAGAGGCAAATCAAGAAGTACCTGTTTGGCTCACACGCTATGCAGCAAGGGCTTCTTACGGTGGTGGCAACAGAAACAGGCGGTCAGGGGGAGGAGCCC GTTATGGTGGCCGCGATTTTAGGAAGGAGGGCTCATTTAATAAAGGAGCAGATTACAATGGTGGAACAGGTGGGTACGGGGTTCCTGCCAATTATAGCGG AGGGTATGGTCAAGGTGTGACTAGTGCTTGGGATTAGATTATTGTCCCATGGCTAATATTCATCCTCATGTTTGTGTATATAAATTTCAGATTTTAATGA TGAAATGTTTTTTCTTCTCGACCATGATTTGCTTGAATTCATGCATTCCATACTCCAGGAAAGCTTGTCATATCTAAGGGTCACATTTTGGACTTAAACT ATGGGCAACTTGTGGGAGGATCTGGGTTGTCTCATTTGTTTAGAATTGAAGCAAGAATCAGGTAACCATGTTGTCCAAATATGTAATCGTGTTGAATTTG AGGCCTTAGAACCATTTTTTAGACTCAGGGAGAAAGCCTAAGAGAAAATTGAATCTGTTCCATATTAGTGTTATATCCATTTGTTGGCTGCAACTTTCTC TTATGCGTTCTTTGGGGACCTTAGACTTGGTTCTTGGAAGGGCTTGTTATGATGCAATTTTTTCCCAAGGGCCACAATCTTAACATCTTGATTGTCCTAT TTCTGAATATTGTAACACCTTCATTTTGGAAAATAGAATTGTAGAAATATTTAAATTTTTAGAGTAATTGTTCC
• Tissue: pods
• Gene name: LI_gene_142410;
• Additional information: details;

Expression of Ll_transcript_282827

FPKM

• PAB: 1.7
• PNAB: 5.1
• PS1: 8.1
• PS2: 4
• PS3: 6.1
• PW1: 4.2
• PW2: 3
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282827

• Blastp: DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.64% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.97% of identity
• Eggnog: purine NTP-dependent helicase activity(ENOG410XNTI)
• Kegg: Link to kegg annotations (AT2G42520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428608.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;