| Id Trinity | TRINITY_DN46134_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_281900 |
| Sequence | GTTAATGACCTAAATAACCTTTGAATGTGTGTTTTGTGAGAGAGGAAGGGGTTGGAATGTTAATGACCTAAATAACCTTTGAATGTGTGTTTTGTGAGAG AGGAAGGGGTTGGAATGTTAATGACCTAAATAACCTTTGTTGAGATTGTCGAGCGAACAGAAAAAACAAAACCCTCACATCACAGTGTTTCGATGGAGCT CTGAATTCATTGATTCATTTCATATTCAATTCATACGCTGATGGCTCACAATCAGATTCAGAATCAAAATCCTCATCTTCACCTCAAGGATTTGGGATCC AAGCTCCACACTCTTCCCTCTTCTAAGGACTCTCTCATCAAGCTTTTGAAGCAAGCATCCACATGCCTGACAGAACTGGATCAGTCACCTTCAGCTTCAA TATTGGATCCAATTAGGCCCTTTTTTAATGCAATTGTTAAGCCTGAGTTGCTGAAGCATCAAGACAGGGATGTCAAGCTTCTGGTTGCAACATGTATTAG TGAGATAACTCGGATTACTGCCCCGGAAGCTCCTTATAGTGATGATGTTCTAAAGGATACTTTTCAATTAATTGTGAGCACTTTCAGTGGGCTAAGTGAT ACCAATGGTCCATCTTTTGGCCGGAGAGTTTTTATATTGGAGACTCTTGCAAAATATAGGTCATGTGTTGTAATGTTGGACCTTGAATGTGATGATCTGG TGAATGAGATGTTCAGTACTTTCTTTGTTGTTGCCAGAGATGATCATAGAGAAAGTGTTCTATCATCTATGCAAACTATAATGACGGTTCTCTTAGAAGA GAGCGAGGATGTCCGTGAGGATCTTTTGTATATTCTACTGTCTAAACTAGGTCGTGAAAAAAAGGGTGTTACTATGGCTGCAAGGAGGCTTGCTATGAAT GTCATACAGCAATGTGTTGTAAAACTTGAACCCAGCATCAAAGAATTTTTGCTATCATTAATGTCTGGAGATATCAAGCCAGTGAACAGTCTAGTTGAAT ACCACGGAATTATCTATGACCTTTATTGCTGTGCTCCTCTGGTACTATCTGGAGTTCTCCCTTATGTGACTGGAGAACTACTGACTGACCAGCTGGAGAC CCGTTTGAAGGCAGTGAAATTGGTTGGCGATATAATTGCTATTTCTGGACATTCCATTCCCGAAGCACTACAGCCCATATTTTTGGAGTTTTTGAAGAGG CTGACTGATAGAGTTGTTGAGGTTCGTATGTCTGTCCTTGAGCATGTAAGGAGCTGTTTGCTGTCAAATCCGTTCAGAGCTGAAGCTCCTCAAATAATAT CTGCCCTGTGTGAAAGACTGCTGGATTTTGATGAAAATGTCCGAAAGCAAGTTGTGGTTGTTATCTGTGATGTGGCATGTCATGCCCCAAAAGCAGTTCC ACTTGAAACTGTGAAATTTGTTGCGGATCGGCTTCGTGACAAATCTCTCCTTGTTAAAAAGTATACTATGGAAAGATTGGCTGAGCTTTACAGAGTTTTT TGTCAGAAGAGCTCGGACACAGTCAATTCCAATGAATATGACTGGATTCCTGGGAAGATCCTTCGAAGCTTCTTTGACAAAGATTTCAGATCAGATATAA TTGAATCTATTTTATGTGGGTCCCTGTTTCCAGCAGAGTTTTTGATCAGTGATATTGTTAAACATTGGGTTGGGATTTTTTCTGGATTCGATAAAGTGGA GGTCAAGGCTCTTGAAAAGATAATGGAGCAGAAACAAAGGTTACAACAGGAGATGCAGATGTATCTATCTCTGAGGCAGTTCTGCAAGGGTAAAAATGAT CCTGAGGTTCAGAAAAAGATTCTATTATGTTTCCGTGTAATGTCCCATTTATTTGCTAATCCCATAAAGGCTGAAGAGAGTTTTCGGATTCTTGATCAAT TAAAAGATGCTAATATCTGGAAAATATTGACAACTATTGTTGATCCAAAGACTACCTTCCATCAAGCTCGCATCTACCGGGATGATTTGCTTAAGATACT AGGCGAGAAACATCGTCTCTATGAATTTATGAATACCTTTTCTATGAAGTGCTCCTATTTGCTTTTCAACAAAGAGCATGTAAAAGCAATTCTTTCTGAA ACGGTCGCTCAAAAATCTGCACTGAATTCTCAGCGCATACAATCTTGCATGGATATATTAGAGATAATCGCTCGTTTCAGTCCATTGCTTCTTAATGGCA GTGAGGAAGAGCTGCTAAATTTACTTAAGGATGATAATCATATGATTAAAGAGGGCGTTTTGCATGTTTTAGTGAAGGCTGGTGGTACTATTCATGAACA ACTTGCAATGACTTCAAGTTCTGTAGACCTTGTATTGGAGAGACTATGTCTGGAAGGCAGTCGTAGGGAAGCCAAGTATGCTGTCCATGCACTAGTTGCA ATAACAAAGGATAATGGGCTCAAGAGTCTCTCTGTTCTGTACAAGAAACTTGTAGACATACTAGAAGAAAAAACATATCTTCCTCCAGTACTGCAGTCTT TGGGGTGTATAGCACAGACTGCAATGCCTGTCTTTGAGACTAGAGAGAGTGAAATTGTCGAATTTATAAATAAGATTCTGAAAAGTGATAGTAAAGAAGA ATATCATACAAGTGCATCTTGGGATGATAAAAGTGATCTTTGTATGTTGAAGGAATATGCTATCCTATGGTGAAATATCAAAGGACCTACAGTCAAGTTC AGTTGATAAGGCACATTTGAGGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_142421; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_281900
| Blastp | Sister chromatid cohesion protein PDS5 homolog B-B from Xenopus with 26.01% of identity |
|---|---|
| Blastx | Sister chromatid cohesion protein PDS5 homolog B from Homo with 25.82% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (495695) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463685.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |