Id Trinity | TRINITY_DN46139_c0_g1_i3 |
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Name Transcript | Ll_transcript_282351 |
Sequence | ATTATATCATAGCATTATGAATGTCTTATGATTATGTATTAATCTATTAAATATTAAAAATTATATATTTTTGATGGAAGACGAAAAATGGAGGGTATAG AAAAGCAAAAGATGATAATGGTGTAGTAGTAAATAAAAAAGCAGGGGAAGATATAATGCTAAATTGTGGGTGGACTATATCGGTCCACTGTAGATCCTGT TGGATGCCTAGTAACGTTGAGAGTAGAAGCAGCAATTGGGGTTGCAGGAAGAGTAAAAGTGTGAAAAGTAATTGTTTTTCTTTCAGTTTAGCACTTACTG GCTTCCTTGCAGCTACTGCTGTGATAGCAAGTGCAGCTGAATTGGAGGAGACTCTCTCCAACATACCTCAAACACTGTCTTCTGAGTGTACTGCAACAGA CTCCTCCTCCTGCAAGAAACCTAAAATACAAAGACCAAAGTCAAGGAAAGCAGAATCATGCACTGTTAAGTGTGTAACCACTTGCATCCGAGGTGGTGCA GGAGAAGGCCCTCTTAATCTCACAAGACCTCTCGTTGTTTTCAAGCAAGGGTTTCGAACGCGTCAATACTGGTAATTTACCTCAACTATTTGCTACCAAT TATGGAACAAATCAAGTCAAATAAAAACAACAATCAGTAATTAAGATTAAAAGAGTCACTTCTTCTTTCCTTCTGCAGTTTGGTGGAGTGTTCAGATATA TGTAATTTGATCAGCGATGTTGAGGATGGAACTTAAATTTCTTTGGTTACCACCAAGTACTCACTTATAATTTATAATTATTTTAATTAATAGTTATAAT TTATAAAGAGGATGAACTCTTCAAATTGATGAAATGTTTGTGCCACATTATGTATTTTGGTGATATTGTATGGACACGATTTTTTTCTTTTGGCATTATG AATGCTTTTTATTAAGTTTTATCTAAGGATAGCACAAACTTAATGCCTAGTGCTTGGTGTTGGTTCTAGTATCTGTGTCCATTCATGTATAGTACGACTT CTTGAGTAGTAATTTGGTGAAATTCAAACCAACTCATAAACCTAAGCAAACTGAAGTCATGTTAAGTTACATTCAAAGACAACTTTGCAAATTAAGAGTT GACCATGTTTGGTTGGATTAAGAGTATCGCCACTTTTCTATAACTGTTGTGACTTGACTTGAATTAAGAGTAGTCTGCAACAAGGTTTCAATGAAAGTAA CTTTTTGCCATAGAAGGAGCTAGCATTATCCACCATTAAAGGTGATACGCTTCACAAGTACATCAAGGGGCCTGAATAGATTCAACAAAAGTATGTGAAA TGTTATATCATACTAAGTTATTGATGATTGAGATGTTATATCAATACCTGTTATAGATGATTGCACACTTTTTTTTGGTATAGATAAATCTTTCAAAAAC TGAAGTTATATGAAATTGTCCTTTACCTAAAAATAGATTATCCCTGTGTCTATATCTTATGGGATATTATCAGTAAATATAATTGAATAAATAACGTGGA ACGTGTGTGAACACAACTCCATCCATTTCCATAACTAGAATGAGATGGATTGTGTATGGTATGATAATGATTTTGGGTGTATAACAAAAAATGTAAAAAT GGAGAAATCCAGTTTAAGGCGATAAATGACAACTTAAAATACAAACATATGAAAATTAATGGAAGTCCGTATACCTCTCCTAGAAAATAGCTGAACTTGT AACACCACCCAAAATCAAACTGTTACTGCATGCAAACAAAAAGTTATCCGTTGATTCTTTTATTTTGTTATTTCTTCTTATCAATAATCTTTTCTTCTTT CATCCATCACCAACCTCTTTCTTTCTTTCTTTTTTCGGCTCCTTCTAAAGCACCCAGTACCATCACCCTTGGCCTTAATTGGCCTTTGGTACCAACATAT TACTAATGATTAGAAGAGATGGTGGTGCATCAACATGATAAAAATAATAATAAGGAAAAAAAGAAAAGAATGAGGTGTGGCCGAAACACACAAATACCTT GTTATTAAAGATTTATTATTACCCTTGTTATGATGATGATGTTGTGGGGGTGTTTAGTCCTTTGATTGCCGCAACTGTGAATGCCAATGGGCGCGCGCTC TGCTATGCTTGTGCGCGCACCACCAACATCCATTTATTCTCATCATAATGTTTACTTTTTTGTTTTGGTATTATTACTGTCAATACCATGTTCTTGTGAA TATGTCTCTGATGGAGAGGCACTATTGAAGTTCAAGAATTCATTGAAGAATGTGGTATCCCTCAGCAGTTGGGATCCAACAATAAACCCAAAGCCACCTT GCTCTGGCAACGTCCCTAACTGGGTTGGATTGTTGTGTATGAATGACAGAGTTTGGGGGTTACGGCTTGAGAACATGGGTCTAACAGGAAACATCGATGT GGAGTCATTGGGGTCAATGCCAGCCTTGAGGACACTTAGCCTAATGAACAATACCTTTGCTGGCTCATTGCCTAACATCAACATGCTCACTAACTTGAAG GCACTCTTTTTGTCATTTAATCATTTCTCAGGAGACATACCTGATGATGCATTTTCCACTTTGCAAAAATTGAGAAAAGTTTATCTCTCAAATAATGAGT TCACCGGTAAAATCCCATCCTCCCTTGCTACCTTGCCTAATCTCCTCATCCTTGCCCTCAATTCAAACAAGTTTCAAGGTCATATCCCTGATTTTCCACA CAAAAAATTGAGGACTCTCAACCTCTCTAATAATGATTTTGAGGGTTCCATCCCCACCAATCTAACCTATTTTGATGCCTCATCCTTTACAGGTAACTCA CGTCTATGTGGAGCACCTCTAAAGAATCCTTGCAAAGGTGAAGCCCCAACGGAGAGTTCAGCTGCTGGAAATATACGCATTGTGAAAATCTTACTTATAA TTGTAATAATTGCAGTATTGATAGTAGCGCTGCTGGTGATAGTGTTGGTTATATGGCCTCGTCTAAACTCCAATAATTATTCTAATAACCCATCTGAGGA ATCATTCCAAGCAGGCATGCAGGCGTCTAGCAAGTATGATAATAATCATCCTCCCACTTATGTGAAAACCAAAAGCCTAGCAGAACAGCGTCATGATGAT CATCCGAAACGTGGTCATGGTCATGGTCATGGTCATACGAAGAAGGGGGAACAAGCTGGGAAGTTGACATTCCTAAGGCATGAAGGGCAAATGTTTGATT TACAAGACTTGCTAAGAGCCTCAGCAGAGATTCTTGGGAGTGCTGGATTTGGGTCATCATACAAGGCAGTGATTATGGATGGGCAAGCAGTGGTTGTGAA GAGGTACAAACAAATGAACAATGTAGGAAGAGAGGAATTCCATGAGCACATGAGAAGGCTAGGCAACCTCAATCATCCAAATATTCTACCTCTCCTTGCT TATTACTATAGGAAAGAAGAGAAGCTGTTGATTTCTTCCTATGTTCACAATGGTTGCTTGGCTACCCATCTTCATGGCAATCATAACTATCAAAAGCCTG GACTTGATTGGCCTACGCGGTTGAAAATAGTGAAAGGTATAGCTCGAGGTTTGAATTACCTATACAATGCACTCCCAAGCTTAATCGTGCCTCATGGTCA TCTTAAATCTTCGAATGTTCTGTTAGATGAAAACTTAGAGCCTCTACTCACTGACTATGCCTTCAGTCCTGTTATCAACCTTGAGCATGCTCAACAAGTG ATCATGCCTTACAAATCACCTGAATATGCTCAACTTGGACGCATTACAAAGAAAACAGACGTGTGGAGTTTAGGAATTATAATACTTGAGATATTGATTG GTAAATTCCCAGAGAACTATCTGACACTGAGGCATAATGCTGATTCTGACATAGCCAATTGGGTGAATAACATGATTACTGAGAAGCGTACGACTGAGGT GTTTGATGTAGAGATGGGAGGAATGGGAAATAATAAAGCTGAATTGCTGAAACTCCTAAAGATTGGATTGAGTTGTTGTGAGGAGAATGTTGAGAGAAGG TTTGATATTAAGGAAGCTCTTGAGCAGATTGAAGAATTGAAAGTGGGTGATGTAACTGATATCATTGCAGATCAATACTCTTCTACTCTCATCACTGCAG AAATGGATTCCTATAGAGCCGTGTGATTGTCAGTCTCACCTTTTTTTTCATTCCTATACACCCGTGTGATTGTGAGTGAGTCTCATCATCATTCACACCT TTTTTTCATTCCTATACACCCATGTGATTGTGAGTCTCATCTCATCATTCACACCTTTGTTTCATTCCTTTACCACATCATGTCTTCAATCTTCATCAAG ATCATCAATTGTATGAACATAAATATATGCATTCCCTTTTCATTTATTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_142454; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_282351
Blastp | Pollen receptor-like kinase 4 from Arabidopsis with 51.11% of identity |
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Blastx | Pollen receptor-like kinase 1 from Arabidopsis with 45.33% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G20190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447616.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |