Id Trinity | TRINITY_DN46139_c0_g1_i5 |
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Name Transcript | Ll_transcript_282353 |
Sequence | ATTATATCATAGCATTATGAATGTCTTATGATTATGTATTAATCTATTAAATATTAAAAATTATATATTTTTGATGGAAGACGAAAAATGGAGGGTATAG AAAAGCAAAAGATGATAATGGTGTAGTAGTAAATAAAAAAGCAGGGGAAGATATAATGCTAAATTGTGGGTGGACTATATCGGTCCACTGTAGATCCTGT TGGATGCCTAGTAACGTTGAGAGTAGAAGCAGCAATTGGGGTTGCAGGAAGAGTAAAAGTGTGAAAAGTAATTGTTTTTCTTTCAGTTTAGCACTTACTG GCTTCCTTGCAGCTACTGCTGTGATAGCAAGTGCAGCTGAATTGGAGGAGACTCTCTCCAACATACCTCAAACACTGTCTTCTGAGTGTACTGCAACAGA CTCCTCCTCCTGCAAGAAACCTAAAATACAAAGACCAAAGTCAAGGAAAGCAGAATCATGCACTGTTAAGTGTGTAACCACTTGCATCCGAGGTGGTGCA GGAGAAGGCCCTCTTAATCTCACAAGACCTCTCGTTGTTTTCAAGCAAGGGTTTCGAACGCGTCAATACTGTTTGGTGGAGTGTTCAGATATATGTAATT TGATCAGCGATGTTGAGGATGGAACTTAAATTTCTTTGGTTACCACCAAGTACTCACTTATAATTTATAATTATTTTAATTAATAGTTATAATTTATAAA GAGGATGAACTCTTCAAATTGATGAAATGTTTGTGCCACATTATGTATTTTGGTGATATTGTATGGACACGATTTTTTTCTTTTGGCATTATGAATGCTT TTTATTAAGTTTTATCTAAGGATAGCACAAACTTAATGCCTAGTGCTTGGTGTTGGTTCTAGTATCTGTGTCCATTCATGTATAGTACGACTTCTTGAGT AGTAATTTGGTGAAATTCAAACCAACTCATAAACCTAAGCAAACTGAAGTCATGTTAAGTTACATTCAAAGACAACTTTGCAAATTAAGAGTTGACCATG TTTGGTTGGATTAAGAGTATCGCCACTTTTCTATAACTGTTGTGACTTGACTTGAATTAAGAGTAGTCTGCAACAAGGTTTCAATGAAAGTAACTTTTTG CCATAGAAGGAGCTAGCATTATCCACCATTAAAGGTGATACGCTTCACAAGTACATCAAGGGGCCTGAATAGATTCAACAAAAGTATGTGAAATGTTATA TCATACTAAGTTATTGATGATTGAGATGTTATATCAATACCTGTTATAGATGATTGCACACTTTTTTTTGGTATAGATAAATCTTTCAAAAACTGAAGTT ATATGAAATTGTCCTTTACCTAAAAATAGATTATCCCTGTGTCTATATCTTATGGGATATTATCAGTAAATATAATTGAATAAATAACGTGGAACGTGTG TGAACACAACTCCATCCATTTCCATAACTAGAATGAGATGGATTGTGTATGGTATGATAATGATTTTGGGTGTATAACAAAAAATGTAAAAATGGAGAAA TCCAGTTTAAGGCGATAAATGACAACTTAAAATACAAACATATGAAAATTAATGGAAGTCCGTATACCTCTCCTAGAAAATAGCTGAACTTGTAACACCA CCCAAAATCAAACTGTTACTGCATGCAAACAAAAAGTTATCCGTTGATTCTTTTATTTTGTTATTTCTTCTTATCAATAATCTTTTCTTCTTTCATCCAT CACCAACCTCTTTCTTTCTTTCTTTTTTCGGCTCCTTCTAAAGCACCCAGTACCATCACCCTTGGCCTTAATTGGCCTTTGGTACCAACATATTACTAAT GATTAGAAGAGATGGTGGTGCATCAACATGATAAAAATAATAATAAGGAAAAAAAGAAAAGAATGAGGTGTGGCCGAAACACACAAATACCTTGTTATTA AAGATTTATTATTACCCTTGTTATGATGATGATGTTGTGGGGGTGTTTAGTCCTTTGATTGCCGCAACTGTGAATGCCAATGGGCGCGCGCTCTGCTATG CTTGTGCGCGCACCACCAACATCCATTTATTCTCATCATAATGTTTACTTTTTTGTTTTGGTATTATTACTGTCAATACCATGTTCTTGTGAATATGTCT CTGATGGAGAGGCACTATTGAAGTTCAAGAATTCATTGAAGAATGTGGTATCCCTCAGCAGTTGGGATCCAACAATAAACCCAAAGCCACCTTGCTCTGG CAACGTCCCTAACTGGGTTGGATTGTTGTGTATGAATGACAGAGTTTGGGGGTTACGGCTTGAGAACATGGGTCTAACAGGAAACATCGATGTGGAGTCA TTGGGGTCAATGCCAGCCTTGAGGACACTTAGCCTAATGAACAATACCTTTGCTGGCTCATTGCCTAACATCAACATGCTCACTAACTTGAAGGCACTCT TTTTGTCATTTAATCATTTCTCAGGAGACATACCTGATGATGCATTTTCCACTTTGCAAAAATTGAGAAAAGTTTATCTCTCAAATAATGAGTTCACCGG TAAAATCCCATCCTCCCTTGCTACCTTGCCTAATCTCCTCATCCTTGCCCTCAATTCAAACAAGTTTCAAGGTCATATCCCTGATTTTCCACACAAAAAA TTGAGGACTCTCAACCTCTCTAATAATGATTTTGAGGGTTCCATCCCCACCAATCTAACCTATTTTGATGCCTCATCCTTTACAGGTTAGCTACTATATA TATTTTTGTCATTCCAATTCTTATACTTCAAAATATACTAATCAGTATGTATAGGTGAAATACTGTTATGATTGTATAAATGGATGAATGCAGGTAACTC ACGTCTATGTGGAGCACCTCTAAAGAATCCTTGCAAAGGTGAAGCCCCAACGGAGAGTTCAGCTGCTGGAAATATACGCATTGTGAAAATCTTACTTATA ATTGTAATAATTGCAGTATTGATAGTAGCGCTGCTGGTGATAGTGTTGGTTATATGGCCTCGTCTAAACTCCAATAATTATTCTAATAACCCATCTGAGG AATCATTCCAAGCAGGCATGCAGGCGTCTAGCAAGTATGATAATAATCATCCTCCCACTTATGTGAAAACCAAAAGCCTAGCAGAACAGCGTCATGATGA TCATCCGAAACGTGGTCATGGTCATGGTCATGGTCATACGAAGAAGGGGGAACAAGCTGGGAAGTTGACATTCCTAAGGCATGAAGGGCAAATGTTTGAT TTACAAGACTTGCTAAGAGCCTCAGCAGAGATTCTTGGGAGTGCTGGATTTGGGTCATCATACAAGGCAGTGATTATGGATGGGCAAGCAGTGGTTGTGA AGAGGTACAAACAAATGAACAATGTAGGAAGAGAGGAATTCCATGAGCACATGAGAAGGCTAGGCAACCTCAATCATCCAAATATTCTACCTCTCCTTGC TTATTACTATAGGAAAGAAGAGAAGCTGTTGATTTCTTCCTATGTTCACAATGGTTGCTTGGCTACCCATCTTCATGGCAATCATAACTATCAAAAGCCT GGACTTGATTGGCCTACGCGGTTGAAAATAGTGAAAGGTATAGCTCGAGGTTTGAATTACCTATACAATGCACTCCCAAGCTTAATCGTGCCTCATGGTC ATCTTAAATCTTCGAATGTTCTGTTAGATGAAAACTTAGAGCCTCTACTCACTGACTATGCCTTCAGTCCTGTTATCAACCTTGAGCATGCTCAACAAGT GATCATGCCTTACAAATCACCTGAATATGCTCAACTTGGACGCATTACAAAGAAAACAGACGTGTGGAGTTTAGGAATTATAATACTTGAGATATTGATT GGTAAATTCCCAGAGAACTATCTGACACTGAGGCATAATGCTGATTCTGACATAGCCAATTGGGTGAATAACATGATTACTGAGAAGCGTACGACTGAGG TGTTTGATGTAGAGATGGGAGGAATGGGAAATAATAAAGCTGAATTGCTGAAACTCCTAAAGATTGGATTGAGTTGTTGTGAGGAGAATGTTGAGAGAAG GTTTGATATTAAGGAAGCTCTTGAGCAGATTGAAGAATTGAAAGTGGGTGATGTAACTGATATCATTGCAGATCAATACTCTTCTACTCTCATCACTGCA GAAATGGATTCCTATAGAGCCGTGTGATTGTCAGTCTCACCTTTTTTTCATTCCTATACACCCGTGTGATTGTGAGTGAGTCTCATCATCATTCACACCT TTTTTTCATTCCTATACACCCATGTGATTGTGAGTCTCATCTCATCATTCACACCTTTGTTTCATTCCTTTACCACATCATGTCTTCAATCTTCATCAAG ATCATCAATTGTATGAACATAAATATATGCATTCCCTTTTCATTTATTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_142454; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_282353
Blastp | Pollen receptor-like kinase 4 from Arabidopsis with 60.95% of identity |
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Blastx | Pollen receptor-like kinase 4 from Arabidopsis with 60.95% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G20190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447616.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |