Ll_transcript_282354

• Id Trinity: TRINITY_DN46139_c0_g1_i6
• Name Transcript: Ll_transcript_282354
• Sequence: ATTATATCATAGCATTATGAATGTCTTATGATTATGTATTAATCTATTAAATATTAAAAATTATATATTTTTGATGGAAGACGAAAAATGGAGGGTATAG AAAAGCAAAAGATGATAATGGTGTAGTAGTAAATAAAAAAGCAGGGGAAGATATAATGCTAAATTGTGGGTGGACTATATCGGTCCACTGTAGATCCTGT TGGATGCCTAGTAACGTTGAGAGTAGAAGCAGCAATTGGGGTTGCAGGAAGAGTAAAAGTGTGAAAAGTAATTGTTTTTCTTTCAGTTTAGCACTTACTG GCTTCCTTGCAGCTACTGCTGTGATAGCAAGTGCAGCTGAATTGGAGGAGACTCTCTCCAACATACCTCAAACACTGTCTTCTGAGTGTACTGCAACAGA CTCCTCCTCCTGCAAGAAACCTAAAATACAAAGACCAAAGTCAAGGAAAGCAGAATCATGCACTGTTAAGTGTGTAACCACTTGCATCCGAGGTGGTGCA GGAGAAGGCCCTCTTAATCTCACAAGACCTCTCGTTGTTTTCAAGCAAGGGTTTCGAACGCGTCAATACTGTTTGGTGGAGTGTTCAGATATATGTAATT TGATCAGCGATGTTGAGGATGGAACTTAAATTTCTTTGGTTACCACCAAGTACTCACTTATAATTTATAATTATTTTAATTAATAGTTATAATTTATAAA GAGGATGAACTCTTCAAATTGATGAAATGTTTGTGCCACATTATGTATTTTGGTGATATTGTATGGACACGATTTTTTTCTTTTGGCATTATGAATGCTT TTTATTAAGTTTTATCTAAGGATAGCACAAACTTAATGCCTAGTGCTTGGTGTTGGTTCTAGTATCTGTGTCCATTCATGTATAGTACGACTTCTTGAGT AGTAATTTGGTGAAATTCAAACCAACTCATAAACCTAAGCAAACTGAAGTCATGTTAAGTTACATTCAAAGACAACTTTGCAAATTAAGAGTTGACCATG TTTGGTTGGATTAAGAGTATCGCCACTTTTCTATAACTGTTGTGACTTGACTTGAATTAAGAGTAGTCTGCAACAAGGTTTCAATGAAAGTAACTTTTTG CCATAGAAGGAGCTAGCATTATCCACCATTAAAGGTGATACGCTTCACAAGTACATCAAGGGGCCTGAATAGATTCAACAAAAGTATGTGAAATGTTATA TCATACTAAGTTATTGATGATTGAGATGTTATATCAATACCTGTTATAGATGATTGCACACTTTTTTTTGGTATAGATAAATCTTTCAAAAACTGAAGTT ATATGAAATTGTCCTTTACCTAAAAATAGATTATCCCTGTGTCTATATCTTATGGGATATTATCAGTAAATATAATTGAATAAATAACGTGGAACGTGTG TGAACACAACTCCATCCATTTCCATAACTAGAATGAGATGGATTGTGTATGGTATGATAATGATTTTGGGTGTATAACAAAAAATGTAAAAATGGAGAAA TCCAGTTTAAGGCGATAAATGACAACTTAAAATACAAACATATGAAAATTAATGGAAGTCCGTATACCTCTCCTAGAAAATAGCTGAACTTGTAACACCA CCCAAAATCAAACTGTTACTGCATGCAAACAAAAAGTTATCCGTTGATTCTTTTATTTTGTTATTTCTTCTTATCAATAATCTTTTCTTCTTTCATCCAT CACCAACCTCTTTCTTTCTTTCTTTTTTCGGCTCCTTCTAAAGCACCCAGTACCATCACCCTTGGCCTTAATTGGCCTTTGGTACCAACATATTACTAAT GATTAGAAGAGATGGTGGTGCATCAACATGATAAAAATAATAATAAGGAAAAAAAGAAAAGAATGAGGTGTGGCCGAAACACACAAATACCTTGTTATTA AAGATTTATTATTACCCTTGTTATGATGATGATGTTGTGGGGGTGTTTAGTCCTTTGATTGCCGCAACTGTGAATGCCAATGGGCGCGCGCTCTGCTATG CTTGTGCGCGCACCACCAACATCCATTTATTCTCATCATAATGTTTACTTTTTTGTTTTGGTATTATTACTGTCAATACCATGTTCTTGTGAATATGTCT CTGATGGAGAGGCACTATTGAAGTTCAAGAATTCATTGAAGAATGTGGTATCCCTCAGCAGTTGGGATCCAACAATAAACCCAAAGCCACCTTGCTCTGG CAACGTCCCTAACTGGGTTGGATTGTTGTGTATGAATGACAGAGTTTGGGGGTTACGGCTTGAGAACATGGGTCTAACAGGAAACATCGATGTGGAGTCA TTGGGGTCAATGCCAGCCTTGAGGACACTTAGCCTAATGAACAATACCTTTGCTGGCTCATTGCCTAACATCAACATGCTCACTAACTTGAAGGCACTCT TTTTGTCATTTAATCATTTCTCAGGAGACATACCTGATGATGCATTTTCCACTTTGCAAAAATTGAGAAAAGTTTATCTCTCAAATAATGAGTTCACCGG TAAAATCCCATCCTCCCTTGCTACCTTGCCTAATCTCCTCATCCTTGCCCTCAATTCAAACAAGTTTCAAGGTCATATCCCTGATTTTCCACACAAAAAA TTGAGGACTCTCAACCTCTCTAATAATGATTTTGAGGGTTCCATCCCCACCAATCTAACCTATTTTGATGCCTCATCCTTTACAGGTAACTCACGTCTAT GTGGAGCACCTCTAAAGAATCCTTGCAAAGGTGAAGCCCCAACGGAGAGTTCAGCTGCTGGAAATATACGCATTGTGAAAATCTTACTTATAATTGTAAT AATTGCAGTATTGATAGTAGCGCTGCTGGTGATAGTGTTGGTTATATGGCCTCGTCTAAACTCCAATAATTATTCTAATAACCCATCTGAGGAATCATTC CAAGCAGGCATGCAGGCGTCTAGCAAGTATGATAATAATCATCCTCCCACTTATGTGAAAACCAAAAGCCTAGCAGAACAGCGTCATGATGATCATCCGA AACGTGGTCATGGTCATGGTCATGGTCATACGAAGAAGGGGGAACAAGCTGGGAAGTTGACATTCCTAAGGCATGAAGGGCAAATGTTTGATTTACAAGA CTTGCTAAGAGCCTCAGCAGAGATTCTTGGGAGTGCTGGATTTGGGTCATCATACAAGGCAGTGATTATGGATGGGCAAGCAGTGGTTGTGAAGAGGTAC AAACAAATGAACAATGTAGGAAGAGAGGAATTCCATGAGCACATGAGAAGGCTAGGCAACCTCAATCATCCAAATATTCTACCTCTCCTTGCTTATTACT ATAGGAAAGAAGAGAAGCTGTTGATTTCTTCCTATGTTCACAATGGTTGCTTGGCTACCCATCTTCATGGCAATCATAACTATCAAAAGCCTGGACTTGA TTGGCCTACGCGGTTGAAAATAGTGAAAGGTATAGCTCGAGGTTTGAATTACCTATACAATGCACTCCCAAGCTTAATCGTGCCTCATGGTCATCTTAAA TCTTCGAATGTTCTGTTAGATGAAAACTTAGAGCCTCTACTCACTGACTATGCCTTCAGTCCTGTTATCAACCTTGAGCATGCTCAACAAGTGATCATGC CTTACAAATCACCTGAATATGCTCAACTTGGACGCATTACAAAGAAAACAGACGTGTGGAGTTTAGGAATTATAATACTTGAGATATTGATTGGTAAATT CCCAGAGAACTATCTGACACTGAGGCATAATGCTGATTCTGACATAGCCAATTGGGTGAATAACATGATTACTGAGAAGCGTACGACTGAGGTGTTTGAT GTAGAGATGGGAGGAATGGGAAATAATAAAGCTGAATTGCTGAAACTCCTAAAGATTGGATTGAGTTGTTGTGAGGAGAATGTTGAGAGAAGGTTTGATA TTAAGGAAGCTCTTGAGCAGATTGAAGAATTGAAAGTGGGTGATGTAACTGATATCATTGCAGATCAATACTCTTCTACTCTCATCACTGCAGAAATGGA TTCCTATAGAGCCGTGTGATTGTCAGTCTCACCTTTTTTTTCATTCCTATACACCCGTGTGATTGTGAGTGAGTCTCATCATCATTCACACCTTTTTTTC ATTCCTATACACCCATGTGATTGTGAGTCTCATCTCATCATTCACACCTTTGTTTCATTCCTTTACCACATCATGTCTTCAATCTTCATCAAGATCATCA ATTGTATGAACATAAATATATGCATTCCCTTTTCATTTATTAAAAA
• Tissue: pods
• Gene name: LI_gene_142454;
• Additional information: details;

Expression of Ll_transcript_282354

FPKM

• PAB: 0.3
• PNAB: 0.5
• PS1: 0.4
• PS2: 0.2
• PS3: 0
• PW1: 0.2
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282354

• Blastp: Pollen receptor-like kinase 4 from Arabidopsis with 51.11% of identity
• Blastx: Pollen receptor-like kinase 1 from Arabidopsis with 45.33% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT3G20190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447616.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;