Ll_transcript_281682

• Id Trinity: TRINITY_DN46143_c0_g1_i7
• Name Transcript: Ll_transcript_281682
• Sequence: GCCGGTTGCCAGTGCCCGCGGCCTCTTCCAGATGCCCCCACCTCGCCTTTCTAACCGGTAATCACTTATTATTCGTTTTCGAGTTGAGTTTTGGAGATAA AAGAATGTTAAAGGAAAGCTTCAGAGTCGTGAAATACAGTTATGAGATGACACTGAAGTCTTCCATTCTTTCTCTTCCAAAACTCGTTAAAATGAGCTTA TAAAAATGTCATAAACTGTTATATTAATTCCTGTGGTAAGTTTATTTGTACAAGTTATTTCCTTAAATCCAAATAACTTCACTGAAGTAAAGTATTGTCA CAAGTCCAAACAAACTGTTTAATTGTAACCTTGTAATGTTCTTGATAATAACATTATCCCTAGTCATGTTTTCTTAGCATGTATGTATATCTTAGTTTGA GCATATAAGCATTGTTGTTAACTAGGTGGTGTGCTTGGTGAGTAGAAATCTTCTATACCACTAATTTGTATCACTCTCTTTGTCATGAGTTGACTGTATT GCATAGATGGCAAAGAGAGTGGTGCAAATATATTGGTATAGAAAATTTCTGTTCATGTTTGGTGGGGACTGGACAGGTATTTTATGGTCAGGGCTGGGGA GTCAGAGTTTGAAAGCATGGGAGTGATAAATACAAATCCAGTGGCCAAGACTTCGGTGGATAACGGGTTATCCGAGAGAGGGAAGAAGCAGGCGATAAGA GCAGCATTTGATTTGAAAGAAATGGGTGCCTGTGATAAGAGCTGTTGGATCTGGCCTGCTATCACTCAAAGAGCTTACCAGACTGCTGAGATTATTGCAG CTGTTAATGCAGTTCCTCGAAGTTATATAGTCCCAGAATATAGCTTTCTGGACGCCCGTGGATTAGGTGCTTATGAAGGAAAAAACTTGGAATCTGTTTC AGAAATATATGCATCAGATGTTATATCTCCAAACACTAAACCTCCTCCCATTGATGATGGAACACCAAATGAGAGTGTTGCAGATGTTTTTGTTCGCATA ACACAACTCATGTCAATCCTTGAAACTCAGTACTCCGGTGACACAGTTGTTATAGTCTCACCAGATTCTGACAATTTGACAATCCTTCAGGCTGGTTTGA TAGGACTGGACTTGCGAAGGCATATGGATCTGTCTTTTGCACCCGGTGAAGTCCGCTTCGTTGACAAAAATGACATTCCTACTTACAAGCAGCCAGCATC TGCTATATATAAATGTTTCAACCCACCGAGTTGTAACTAGTGATTTTCTAAGCTATAGCAGAACAATTGATATTGATGAATGGTTCAAGTTGTTACTACA TCTTCTGTTTCATTGTATATTCTTGTCATGTTTTATAAAAAATGAAAATCTTGTAAAAAGGAACTGCCTAAACTATTCATGGAATGATACTAGTATAAAA AAACTTGAGATGAACTTGAGCTAAACACCAAGGAGTAAATTATGTGTGCATGTAATTTAATGTTTCATGGAAGGAAAATAGTAAACAGATATTCATCTTG AGTGAAACCTTGAAAGCATATTTCCCCCTCTCTTTCTGGGTTGTATCAGATTCGTTTACAGCAAGCAAAATCACCCAAAATATCAAAATTCTATATACTC TGATGGTTAACTAGTCTACTATACAAATGGGAAATATATATGCTGGAGAATAATGATTAATTTGGTCCTCCATCATGGTTAATACATAATGGAGAGTTAA GTAACAACTGGGCTAGTGACATAAAGATTCACTAGATTTTAGAAAGACGAAAAGTTAAAATTCTATGTGAAAGTGTTGTTAGTGCACAATTGTCTAACCA GGAAAAAAATGATAAATACTTAGTTTTACTAAAATTGATTTTAATAAAACCCCAATAGGATAGTTTGGATTTTATTGACATTCCGAAAGCCACTAATTAA GACATCAAGTAGAACCCACGGCTTATTAAATGATACTTGTGATTGAAATGGTGTTACTTTATATTAATGTTAAAACATACTTCAAACTTATACTTATGAT TTTGAATTCCATGACTATGCATATCAGTTTCAACTTGAAGATGCTATTGAAATGGAAGACTCTCTGCAAGGTTGAAAACTGCTATAACAGAAGCAACATC CACAGAGAATGTTGCTGAAATTATGTCACTATTGAAGAACGCCATAGACGAGGAACGATACCATGATGCTTCAAGATTATGCAGACACACCAGCGGTGGA CTGGTTTCAAAAAATGTATGTGAAATGGTCAAACATGCGATCAATGAAGCACAGAAAAGAAGTAGATTATCTGAGTATACATCTTTTAGCCGGATTACCA GTTCAAGAGGGGATTTAGATCCTTTTGATGGACTCTATGTTGATGCATTTGGCCTTTATGGTGCTGACGTAGTTCAATTGAAGTGGAAATTTGGACACTG GAATGATATGGATAGTGAAAAGAATCCTTCAGATGTAGAGTTCATTGAATATGTAGAGGCAGTGAAGTTGACAGGTGACTTTTCATGCTAGAATTGAGAG AAGCAATTGCAAGGCAAACCTTGGGAGGCATCCCAATGAACTGGGAGTGGGCATTGGACATCATATGAAAGGTGCAGATATTGGTTTCCTTTATATTGTG CCTGATCAAAGTTTTATTGTGCTATTCAACCGGTTGAAACTACCAGAGTGAGCCATAGTTCCCTAATCCAGTCTAATTATTTATCACATTATTTAGAGTG ATAGTTTTACCCAAATGCAGCCCTTGTATTTATCTATTTATAATAGAGCATTATGAACATCACTCGATACATATAGCCGTCCCTATTCAGTGGAATTAAG GCTTGATTGTTGTTATTTTATAAATTTTTCTACCTTCTTCAATCCTTT
• Tissue: pods
• Gene name: LI_gene_142505;
• Additional information: details;

Expression of Ll_transcript_281682

FPKM

• PAB: 2.8
• PNAB: 0.3
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.5
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281682

• Blastp: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase from Mycobacterium avium complex (MAC) with 27.72% of identity
• Blastx: Protein EXECUTER 2, chloroplastic from Arabidopsis with 64.13% of identity
• Eggnog: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (By similarity)(COG0588)
• Kegg: Link to kegg annotations (MAP_3981)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463780.1)
• Pfam: Histidine phosphatase superfamily (branch 1) (PF00300.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;