| Id Trinity | TRINITY_DN46144_c0_g2_i15 |
|---|---|
| Name Transcript | Ll_transcript_282560 |
| Sequence | ATATTGTTTACCATTAGTCATTTTATCTGACTGTTGCTCATGTTCATGAAATACACTTATGAGATGACTCCCAAGCTCTCCCTTTCTCTTTCTCTTCATT CCCCTCTAAAAACCAACAAGCAAACAAACCCTAAGGCTATGTTTGGTAATTATGAGGGAAAGGTAAAAAGAGAGATCAAGGGGGGAGAAAGGGAAGGAGA AAGGAAGGCAAATCAAGTTAAATCTCCCTTTGTTTGAAAGTGTGAAATTTAGATGGGAGAAGACTAAAGTAATGACAATGCAAGAATATTGTTATACTTT CCCTTTAAAAATCTAGTTATCAATGGAAAATGGACAATAATGTAATTATAAAATTTTACTATAGATATTTAGATAGTTTGACATGTTTGTCTCCATAAAA AGAAACCATAAAAATAGGCAAGTGGAGGGTTTTATAGGGCTCTAGAAAACCTTCAAAACATTCTTCTCTCTTTCCCCCAAACTCCCAAATAAGGGAGACT CTGTCTAGAGCATGTGGAACAAAAACATGAAATATGTTTACAAAATCTTCCGGGCATGTTTATCCTTTCTAGTAATACAGTCTTTCTCTGGTTATGATTT TAGTTTGGATTTATGTTGTATCTGTTGTTGATAATAGGAGACAAGATGAGGAGTTGGATGAGCTTACTTTGAGTGTACAAAGAATTGGAGGCGTTGGACT TACAATACACGAAGAGCTCCTAGCACAGGAAAAGATTATAGATGAACTTGGTTCCGAGATGGACAGTACATCTAATCGTCTAGACTTCGTCCAAAAAAAA GTGGGAATGATCATGAAGAAGGCTAGTGCAAAGGGCCAGATCATGATGATATTGGGTTTGCTGGCTTTGTTCATTTTCCTCTTTATCTTGGTATTCTTCA CTTAGTGAGAAGATCTTCACACTGCACTCTTTCCTACATGAAAAGAGATCTCAGTTTTTGTGAAGAAGATACAAGATTAATGGGGCATGGATATGCCTTA TATTAACTAAATGGAAGCCCTTTTTGGTCTATTGAAGGTTGCTCAGAATTCTGATCCTGATGAAAAAGGGAAGCAAAATATACTGTAGGAGGATTTTGAT TCTGAACAAATTGGACTATAAATATGATCTGAACTAGTAGCATTTTTTTGAACTTGTGGTATTTGTTTTATTATGCTTTCTGACATTATTGAATAATAAG GTAAACTGGTTTACACTAGATTCTTCAACCTTAGCATGTTTGAATTTTTCACACTTCAAATCGATTCGTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_142513; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_282560
| Blastp | Syntaxin-61 from Arabidopsis with 77.53% of identity |
|---|---|
| Blastx | Syntaxin-61 from Arabidopsis with 80.28% of identity |
| Eggnog | syntaxin(ENOG410ZZA3) |
| Kegg | Link to kegg annotations (AT1G28490) |
| CantataDB | Link to cantataDB annotations (CNT0002625) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435599.1) |
| Pfam | SNARE domain (PF05739.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |