Ll_transcript_282550

• Id Trinity: TRINITY_DN46144_c0_g2_i7
• Name Transcript: Ll_transcript_282550
• Sequence: AAACAATTAAGTTAAGAAACTAAAATATTAATTTTGCCTATTTATTACTAGTTCTATTAGATTTGAGGATAAAATAATGAGAAAAATTTAGTGAAAAAAA ACATCAATATAAAAAGTTGAGAAATGAAACAGAGGAGAGAAAGCAGAGTGTAACAGTGTTTTTCTATTTTCCTCTATCTCCATAAGATGCCCTCAGCTCA AGATCCATTCTACGTTGTCAAGGAAGAGATTCAAGATTCTATCGATAAGTTGCAATCTACTTTTCACCAATGGGAAAACACTCCTGATGCCGGGGAGCGA TCACATCTTTCAAAGGAAGTTCTTACCGGTTGTGAAAGTATTGAATGGCAGGTGGATGAATTGGACAAAGCAATTGCTGTAGCGTCTAGAGATCCTTCTT GGTATGGCATTGATGAAGTGGAGATTGAAAACCGTAAGAGGTGGACCAGCAGTGCTCGTGCCCAGGTGCGGACAGTGAAGAAAGCTGCTGAAGCTGAAAA GGGTCCAAATAAAACAAACCATGCTAGTGTCAACGGGATGCACAGGGAATTAATGCGGCATCCTAATTCTCATCAATCTGATATATCCAATAACTATGTT ACCCAGAATAGTGATGACTTCATAGAATCCGAATCAGATAGACAGATGCTTCTTATAAAGTACTTATTTACTCTCTTTATATTTCTTGCGCGCGACATTG AGTTAAGCATTTGTCTTGCCTGACATGTCCTTGCTCGTTTTAACTGACTGTGTGCAAACGAGGTAGAAAATATTGCATTGGTTGTTTGTTTGACCTCTTG AGTTGATTGAGTTTTATTGTCCACTTCTCTCCTTTGCTTTCCGAGACAGAAGTGAGCTCCTTTATACTACCTGGTTGAAACTGTGAAGACTGGAGACATT CACACTTTTGTGCTGTTCTACTAAAAATTTTCTGTCCGCGGAAGGATTTGTTTCTCATTTCCATCACTGCCAATTATATTTAAGTGTTGTTTTGATACGC GATTACTATTACATAAGAATCAAAACGAAAACCATGAATTTCCTTTGCTTTCCTCCGGTTGCTATTCCGTTTTATTTATTATTTATATTATATCAATTGG TGCTCATAGGAAGCAGGATGAGGAGTTGGATGAGCTTACTTTGAGTGTACAAAGAATTGGAGGCGTTGGACTTACAATACACGAAGAGCTCCTAGCACAG GTAGATTTAAGAGGTTTTATGTTCTATGCTTCTAGCTATTTTGATTCAAAAAGTACGAGACTAGATAACGTTTGTTTATTTATGTGTTTCCTTCAAGTGT CTTTAGAAGTTGTGTTCTTATGCCTGATTCAATTTCTGCGAAAAATTTATCGTTCTAAAAATGTGTAAGTCTTGATGCTTCAGGAAAAGATTATAGATGA ACTTGGTTCCGAGATGGACAGTACATCTAATCGTCTAGACTTCGTCCAAGTGAGTTCTACTATAGTTTCGATTCTCTTATTAAAGTGGTTATGCCCTCTT CAATGTGAAGGTTAAAAATGTTTCTTTTCGGTTATGATCACAGAAAAAAGTGGGAATGATCATGAAGAAGGCTAGTGCAAAGGGCCAGATCATGATGATA TTGGGTTTGCTGGCTTTGTTCATTTTCCTCTTTATCTTGGTATTCTTCACTTAGTGAGAAGATCTTCACACTGCACTCTTTCCTACATGAAAAGAGATCT CAGTTTTTGTGAAGAAGATACAAGATTAATGGGGCATGGATATGCCTTATATTAACTAAATGGAAGCCCTTTTTGGTCTATTGAAGGTTGCTCAGAATTC TGATCCTGATGAAAAAGGGAAGCAAAATATACTGTAGGAGGATTTTGATTCTGAACAAATTGGACTATAAATATGATCTGAACTAGTAGCATTTTTTTGA ACTTGTGGTATTTGTTTTATTATGCTTTCTGACATTATTGAATAATAAGGTAAACTGGTTTACACTAGATTCTTCAACCTTAGCATGTTTGAATTTTTCA CACTTCAAATCGATTCGTCA
• Tissue: pods
• Gene name: LI_gene_142513;
• Additional information: details;

Expression of Ll_transcript_282550

FPKM

• PAB: 0.1
• PNAB: 0.4
• PS1: 0.3
• PS2: 0.1
• PS3: 0.4
• PW1: 0.3
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282550

• Blastp: Syntaxin-61 from Arabidopsis with 61.64% of identity
• Blastx: Syntaxin-61 from Arabidopsis with 61.64% of identity
• Eggnog: syntaxin(ENOG410ZZA3)
• Kegg: Link to kegg annotations (AT1G28490)
• CantataDB: Link to cantataDB annotations (CNT0000374)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435598.1)
• Pfam: Syntaxin 6, N-terminal (PF09177.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;