| Id Trinity | TRINITY_DN46144_c0_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_282552 |
| Sequence | GAAAACAGATATAAAATCATTTTCAACTCCACAAGCACACCTTTAGATTATTAAGACTCTGTACCATCTCTTCATCATGCATCTTAATGTTTTGAGTCGA TCACCTCTTTCTTGCATGGCCCACCCGCCCTGCAATATAACCTATCCAAGTGGCTGAAATGTATCTTTTTGATAGGAAGGTGGATGAATTGGACAAAGCA ATTGCTGTAGCGTCTAGAGATCCTTCTTGGTATGGCATTGATGAAGTGGAGATTGAAAACCGTAAGAGGTGGACCAGCAGTGCTCGTGCCCAGGTATCCA TAACATATGCCAAACTTTAGTAAGAGTGAGGAGAATACATTCAACTTTTTTCTTCTTCTTAAAGTAATATATAGTTGTTAGTTCAGCGTTATTCTCTTAT TAGTACCACACATTAGATTCCCTTGTTTTTTAATTAGTATCTCACATTTTACATTCTTTTGTCTCTTTATATCTGCATGGTACTCCTGAATGATTGTAGT ATATTATTAGGTGCGGACAGTGAAGAAAGCTGCTGAAGCTGAAAAGGGTCCAAATAAAACAAACCATGCTAGTGTCAACGGGATGCACAGGGAATTAATG CGGCATCCTAATTCTCATCAATCTGATATATCCAATAACTATGTTACCCAGAATAGTGATGACTTCATAGAATCCGAATCAGATAGACAGATGCTTCTTA TAAAGTACTTATTTACTCTCTTTATATTTCTTGCGCGCGACATTGAGTTAAGCATTTGTCTTGCCTGACATGTCCTTGCTCGTTTTAACTGACTGTGTGC AAACGAGGTAGAAAATATTGCATTGGTTGTTTGTTTGACCTCTTGAGTTGATTGAGTTTTATTGTCCACTTCTCTCCTTTGCTTTCCGAGACAGAAGTGA GCTCCTTTATACTACCTGGTTGAAACTGTGAAGACTGGAGACATTCACACTTTTGTGCTGTTCTACTAAAAATTTTCTGTCCGCGGAAGGATTTGTTTCT CATTTCCATCACTGCCAATTATATTTAAGTGTTGTTTTGATACGCGATTACTATTACATAAGAATCAAAACGAAAACCATGAATTTCCTTTGCTTTCCTC CGGTTGCTATTCCGTTTTATTTATTATTTATATTATATCAATTGGTGCTCATAGGAAGCAGGATGAGGAGTTGGATGAGCTTACTTTGAGTGTACAAAGA ATTGGAGGCGTTGGACTTACAATACACGAAGAGCTCCTAGCACAGGTAGATTTAAGAGGTTTTATGTTCTATGCTTCTAGCTATTTTGATTCAAAAAGTA CGAGACTAGATAACGTTTGTTTATTTATGTGTTTCCTTCAAGTGTCTTTAGAAGTTGTGTTCTTATGCCTGATTCAATTTCTGCGAAAAATTTATCGTTC TAAAAATGTGTAAGTCTTGATGCTTCAGGAAAAGATTATAGATGAACTTGGTTCCGAGATGGACAGTACATCTAATCGTCTAGACTTCGTCCAAGTGAGT TCTACTATAGTTTCGATTCTCTTATTAAAGTGGTTATGCCCTCTTCAATGTGAAGGTTAAAAATGTTTCTTTTCGGTTATGATCACAGAAAAAAGTGGGA ATGATCATGAAGAAGGCTAGTGCAAAGGGCCAGATCATGATGATATTGGGTTTGCTGGCTTTGTTCATTTTCCTCTTTATCTTGGTATTCTTCACTTAGT GAGAAGATCTTCACACTGCACTCTTTCCTACATGAAAAGAGATCTCAGTTTTTGTGAAGAAGATACAAGATTAATGGGGCATGGATATGCCTTATATTAA CTAAATGGAAGCCCTTTTTGGTCTATTGAAGGTTGCTCAGAATTCTGATCCTGATGAAAAAGGGAAGCAAAATATACTGTAGGAGGATTTTGATTCTGAA CAAATTGGACTATAAATATGATCTGAACTAGTAGCATTTTTTTGAACTTGTGGTATTTGTTTTATTATGCTTTCTGACATTATTGAATAATAAGGTAAAC TGGTTTACACTAGATTCTTCAACCTTAGCATGTTTGAATTTTTCACACTTCAAATCGATTCGTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_142513; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_282552
| Blastp | - |
|---|---|
| Blastx | Syntaxin-61 from Arabidopsis with 72.5% of identity |
| Eggnog | syntaxin(ENOG410ZZA3) |
| Kegg | Link to kegg annotations (AT1G28490) |
| CantataDB | Link to cantataDB annotations (CNT0000374) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435599.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |