Ll_transcript_282147

• Id Trinity: TRINITY_DN46155_c3_g2_i3
• Name Transcript: Ll_transcript_282147
• Sequence: GTTATCCTGGCTCGAAATTTCAGGTATAATCTATGCATGAAAATTTATTTAAGAGCAGGTAGCGTTATGTAGAAAAATACGTAGAAAACGTATTTGAAAA GTTAAATACATGAGATTTAGTGAGAGAGAAAAAAAGGTAAATTATATGGAGTGGGGTGAGAGAGAAAGAAACGGGCACTTTTAGAAATAATCCACGGACC CTTTCACTCATTCAATGCTTTACCAAACTCCCCATCCTCTCCACTTTCAATTTCATCCTTTCCCTTCTTCTTCATCTTCTTATTCTATCTCTCCCCTTCA AACCACATCTTCTATTCTCTCTCTTCCTCTCTCTAAGGTATTCACTCTCTCTGCATGTGAGTTTTCTTAATTTAATTAAGTAATGAAACAAAACAAATGT TAAGTTGTGTGTTTTGGTTTGTTTATGTTATATAGGTTGAAACAGAAATGGAATATTGCATGGAAGGTGCGTTGAAAACATGTTTAAGGAAAGACATGAC CGTGAAAGTGAGCCCACAAACCTTCATGGAGGATTTGAACGTCCAAAATGGCACACCTTGCGATGATTTTTTATTCGTGGATAACCTCCTTGACTTCTCA TACGTGGAACAACAACAAGACGAAGAAGAACCGCAACAACAACACAAGGAAGTTGAAGGTGAAGGTGAAGATGAAGGCTCTGCTTGTGTCTCTCCTAGAA AAAGCAACGAAATTTGTAACCTTTCTCTCAGACATGAATTTCCCTCTTTACCCACTAGCGACCTTAGTGTTCCGGAGGATGTTGCTGACTTGGAGTGGTT GTCTAATTTTGTTGAGGATTCCTTCTCGGACTTCCCCACCGTAACAACCACCATGACGGAGAATCCAAATACTTTTTTTGCTGAGAAAGAAGCCAAGCCG TTAAACCCGGTTTTTATTCAACCATGTTTCAAAACCCCGGTTCCAGCAAAGGCAAGGAGCAAGCGAACCCGGTCCAGTATTCGGGTTTGGTCACTCGGTT CACCTTGCTTCACCGAGTCATCAACCAGCTCTACTTCTTCCACCTCCTCTTCTTCCTCACCAACAAGCACTTTGCTAATTTACACCAACTTGGTCCAAAA CCTGGACCAGGTTTGTTCACCACCGAAAAAACCAAAGAAAAGGGTTTCTTCTGACGGTTCGGTCCCGGCGCCACGGCGTTGCAGCCATTGCGGCGTTCAG AAAACCCCTCAGTGGCGAACCGGGCCACTGGGAGCTAAAACTCTCTGCAACGCTTGTGGGGTCAGGTTTAAGTCGGGTCGGCTCTTACCCGAATACAGAC CAGCTTGTAGCCCAACGTTTTCAACCGAATTGCACTCGAACCACCACCGCAAAGTGCTCGAAATGCGGCGGAAGAAAGAGGGCACCGGTGGTGTTGAGAC CGGTTTTGCACCTCCTCCGATAGTTCCCACTTTTTGATTATTAGAAACGAAAAAGAAAGCTAGGCAGAGAAAAAAGTTAGCATAGACATTAGACCCGGTT CGTATGGACCCGAACCCGAGTTAGTGTACATTTTTCACTTCATGTTGAGTATGGTAGGTGTTAAGCTTTGTAAGTGATTACTATTTACTATTAGACTTTC AAGTCCAAGACATTTGGCTTTTTAGTTTTTACTTTTTACCTGTCTTTTTTATTTAATTTTAATTTGGATATTATATTTTGAAATCTAAATATTTATGTAA AGTAATGAGATGGGTGTGATGAATAGTGGTTGGTGGTTTGGAAATGAAAGTGTTAAAAAGCTTTGTATCTAATGGGGCTGTTGAAAGGCATAAACTTTAT GAGAGAACAGACACAGATAGAGGGTAGTTAAACGGCTTTCTTGTGTGCTTAGATGAAAGTACTTTGTTGGGAAACTGAAGCATTTGGAAAGTAAGTAACT GCGTAAATGGATGGATACTATCCAAACTCCAAACCTTTCAATCTTTT
• Tissue: pods
• Gene name: LI_gene_142592;
• Additional information: details;

Expression of Ll_transcript_282147

FPKM

• PAB: 0.5
• PNAB: 0.1
• PS1: 0.1
• PS2: 0.5
• PS3: 0.2
• PW1: 0.2
• PW2: 0.6
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282147

• Blastp: GATA transcription factor 5 from Arabidopsis with 46.67% of identity
• Blastx: GATA transcription factor 6 from Arabidopsis with 54.15% of identity
• Eggnog: Transcription factor(COG5641)
• Kegg: Link to kegg annotations (AT5G66320)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422188.1)
• Pfam: GATA zinc finger (PF00320.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;