Ll_transcript_282677

• Id Trinity: TRINITY_DN46170_c0_g5_i1
• Name Transcript: Ll_transcript_282677
• Sequence: AAAGAAAATAACTTGTACAAAATGATGCTAGGGGAACACCATCGTTCAAATCCAACCATCCACGTACCTCCTTGGCAAGATCCAACGGAGGATATGTACT CTTCTTGCTTCACTAACGACGTTACTGACGGCAATGCTGCTGCCGCTGATTACTCTCCCTATTACATGCAGGAAGCGTTGACAGCGCTGCACCGTTACCT GCCGTCGAATGAAGCTGATTCTCACTTCGACTCTGAGATTCCGGGGCGTGAATCAGACGCGCCGGTTGATGCATATTCCTGCGACCAGTTCCGTATTTAC GAGTTCAAGATACGTAAGTGTGCACGTGGCAGGTCACATGACTGGACCGAATGTCCGTACGCTCATCCCGGAGAGAAGGCACGCCGGAGAGATCCTCGGA AGTTCCACTACTCCGGCACGGCGTGCCCTGATTTTCGGAAAGGTAGTTGCAAGAAAGGTGACGCGTGTGAGCACGCGCATGGAGTTTTCGAGTGCTGGCT TCACCCCACGCGGTACCGCACGCAGCCATGCAAGGACGGAACCAGTTGCCGGAGAAGGGTTTGCTTCTTCGCCCACACGCCGGAGCAGCTTCGAATCGTG CCTAATCACAGCCCTAGAAGCATTGATTCTTATGACGGTTCTCCTATGAGAAAAGGAACGATGGCGTTTATGTCATCTCCGATTTCTATCTCACCGCCGA TGAGTCCTCCGGCTGAATCGCCGCCCATGTCCCCGATGACTAGAAGCTCAATGAATGACATGGTGGCTTCTCTGCGTAACTTACAACTTGGGAAGGTGAA ATCTATGCCTAGTAACAGAAACATTATTCCAATGGGTTCACCTGGGTTCGGGTCACCGAGAGTTTCGTTGCTTCGAGCCGGGTTTCTTAGCCTCCCTTCA ACACCAACCCAGGTTCCGGGTCGGGGCAGTGTTAGCCACTTCGATCAATGGGACCAGAACCGTGGGGAGGAACCGGTTATGGAGAGGGTTGAGTCTGGAA AGGGTATAAGGGCTAAGATGTTTGAGAAACTGAGCAAAGAGAACTCTCTTGATGGGTCGGGTCAAGTTTCGGATGGAGCCCCAGATGTTGATTGGGTTTC TCAGCTGTTGGAGTGAACCTGGTTGGATCCACAGAAATTGAGCAAAGATAACTTCTTGGAAATGGGAAATGCGATTTTTTTGTTTTGTTGTTTTTTTGTA ACATTTCTCCCTGATTTCCTTTAATCTCAGTGTGTATATAGAGTATGAGGAAGAGGGGGAAGAAATGATGAATGATTTATGATTATAGATGCAGCTACTG ATGAAGATTCTGTATATTTTTATGGTCAAAGTTGGGGTGAAGAAGATTGAAGGGTAGCTAGGATTTCTATTTTGGGTGAGTTTGGAAGATAAGAGCACCC AAATTAAAGCTTTGCTTTTGTATAGTTTGCAGATTATTATTGTTATTATGAATTACTGTCATGTATTAACTAAACCACCCTGTTTATCACTTCCTAATCT CATTCATATACAAATGTCTGTTATATTGCGCCATGCTCCTATCACTTGTTATGCATACTTAGTTACATTTCCATGATGTATATCTTTATTAAAATTGAGG CCTTGAATGTGCTAGTTTTTTCTGTTGACTGTGGTATCTTGTTTTTATATATATTTGGCACTGAGATCTTGTAGATGAAAA
• Tissue: pods
• Gene name: LI_gene_142689;
• Additional information: details;

Expression of Ll_transcript_282677

FPKM

• PAB: 7.8
• PNAB: 27.3
• PS1: 26.9
• PS2: 24.4
• PS3: 21.2
• PW1: 66.9
• PW2: 50.6
• PW3: 21.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282677

• Blastp: Zinc finger CCCH domain-containing protein 49 from Arabidopsis with 60.18% of identity
• Blastx: Zinc finger CCCH domain-containing protein 20 from Arabidopsis with 55.7% of identity
• Eggnog: zinc finger CCCH domain-containing protein(ENOG410XR0Z)
• Kegg: Link to kegg annotations (AT4G29190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436217.1)
• Pfam: RNA-binding, Nab2-type zinc finger (PF14608.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;