Ll_transcript_281339

• Id Trinity: TRINITY_DN46178_c6_g1_i2
• Name Transcript: Ll_transcript_281339
• Sequence: TCAAATCAGGATGAAGGAGTTGGATATTGAAAAAACAGCCTTTAGAACTCATGAGGGGCACTATGAGTTTGTGGTTATGCCCTTTGGCTTAACTAATGCA CCATCCACATTCCAAGCTTTGATGAATGAGGTATTGAAGCTTTTTTTGAGAAGGTTTGTATTGGTTTTTTTTGATGATATCCTAGTGTTTAGCTCTAACC TAGAACTACATTGTGAGCATTTGCAACAAGTCCTAGAAGTGATGGAAGTGCACTCATTGAAAGCTAATAGGAAGAAATGCACCTTTGCTCAAGGGAAGTT GGAGTATTTGGGCCACATCATCTCTGCAGAAGGGGTGCAAGCTGACCAAAACAAGATAGAGGCTATGAGTTCTTGGCCAATCCGTAAGGATGTGAAGGGA TTGAGGGGATTTCTAGGTTTCACTGGTTATTATAGGAAGTTTGTGAAGGATTATGGCAAGAAGGCTAAACCTCTCACTGACTTGTTGAAGAAGGATGGGT TTAAGTGGGATGATGCTGCCTTACAAGCCTTTCAGGTCCTCAAGGCTGCAATGATAGACTTACCTAAACTAGCTGTACCAGATTTCACTAAAGTGTTTAT AGTGGAAACTGATGCTTCTAGTAAGGGTCTTGGAGCTGTTCTAATGCAAGAGGGTAAGCCACTTGCTTATTGGAGTCAGGGTTTGTCTCTAAAAAACCAG CAGAAATCTGTGTATGAGAGGGAATTAATGGCTCTTATTCAAGCTGTTCAGAGGTGGAAACACTACTTGTTGGGAAGGCACTTCATCATCAAAACTGACC AGAGGAGTCTACAATTCCTCAATGATCAAAGACTTTTTTCAGAAGAGCAGTTCAAGTGGGCTGTGAAATTGATTGGGATGGATTTTGAGGTTCAGTTCAA ACCTGGGAAACAGAATTGTGTAGCTGATGCCTTGTCCAGAAAGTGCATGTATGCCATTTCTCTGGTTAACAAAGAAGAGATAGAGAGTTGGACTCAAGAG GTAGCACAAGATCCTAAGTGGCAAGTGATGATTCAAGACTTGATTATAAACCCTGATGCTCATGCAGGGTTTGAATTGAAAAGAGGATTGCTTCTGCACC AAGGCAGGTTGGTGTTAGCTAGGGATTCTAGCAGGATTCCCTTGATTTTGAGGGAATGTCATGAATCTCCTTTGGGGGGTCACTCAGGGTACTACAGGAC TTATAAGAGAATATCCAGCTGTGTTTATTGGATAGGGATGAAAGCAGAGATCAAGAAGTTTGTGGCAGGGTGTGAGGTCTGCCAAAGGAATAAGCACTCT AATCTGTCACCAGGAGGACTCCTACAGCCCTTAGCCATTCCTGCTCAAGTTTGGATGGAGGTTTCTATGGACTTTATTGGTGGGTTGCCCAAGAGTAGAG GGAAGGATACCATCCTAGTGGTAGTGGATAGACTATCCAAATATGCCCACTTTTATGCTTTGAGTCATCCATTTTCTGCCAAGGATGTGGCTCATGTGTT TGTGTCTGAAGTTGTCAAACTGCATGGATTTCCCTCTGCTATCATTTCTGATAGAGACCCTATCTTCCTCAGCACTTTCTGGAAGGAGCTATTCAGAGTG GCTGGTACTCAGTTGAAGTTAAGCACCTCATACCATCCTCAAACTGATGGTCAAACTAAGGTGGTTAATAGGTGTTTAGAGTGCTATTTGAG
• Tissue: pods
• Gene name: LI_gene_142731;
• Additional information: details;

Expression of Ll_transcript_281339

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 1
• PS3: 0.1
• PW1: 0.1
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281339

• Blastp: Transposon Tf2-6 polyprotein from Schizosaccharomyces with 33.22% of identity
• Blastx: Transposon Tf2-9 polyprotein from Schizosaccharomyces with 33.22% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPAC27E2.08)
• CantataDB: Link to cantataDB annotations (CNT0000296)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_015964281.2)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;