Id Trinity | TRINITY_DN46180_c9_g1_i1 |
---|---|
Name Transcript | Ll_transcript_283023 |
Sequence | AGCAAAACCATATAAAATGTCAAAGGCAAGAGATTCACCAACTCACTCTGAATCTAAGAGCACCGCCACCACAACGAGAACAGCTTCATGGCTTTTAGCA CCGTTCCTCTTACCTGTCCTAGTGGCTGCGCTTTTCTACCGGTTCGACCCATTCGACCCGGTTCATTTCCCACCCAACGTGTTAAACCGGTTCACTTTCA TAGCTCCGGCGCGTAACAACCGAATGCGTGTAGGATCTGAAGTTATGGCAGAGGGACACGTGGCGGGACCGGAAGACTTTGTTTACGACGCTTCGGCGCG TGTTCTATATACGGGGTGTGAGGATGGGTGGATAAAGCGAGTTACGGTGAATGACTCGGTGGCTGACTCGGTTGTTGAAAATTGGGTCAACACTGGGGGA AGACCGCTTGGGCTAGCTTTCGGCCCGAACGGTGAACTCATAGTCGGTGACGCTGATAAGTTGAGGTACAGCAATTGCCGTGTGATTCCGAAACACAATG TTGCAGCCGCTTCGGCAGCAAAGTAACGGCATGGATCGCATTAGGACATCATCAAGCCATATCGAATTCAAAAATATTTTTTTAATTACAAAATAATTTA CATTGAAACAACCGCAATTACTGTAACCGCGGCGCAATTTAAAACACCG BLAST |
Tissue | pods |
Gene name | LI_gene_142753; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_283023
Blastp | Protein STRICTOSIDINE SYNTHASE-LIKE 4 from Arabidopsis with 45.6% of identity |
---|---|
Blastx | Protein STRICTOSIDINE SYNTHASE-LIKE 4 from Arabidopsis with 49.54% of identity |
Eggnog | SMP-30 gluconolaconase LRE domain protein(COG3386) |
Kegg | Link to kegg annotations (AT3G51420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423894.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |