Ll_transcript_281883

• Id Trinity: TRINITY_DN46185_c2_g1_i8
• Name Transcript: Ll_transcript_281883
• Sequence: CAACAACACAACACAATGACACTCATAAACACCATTAACGAAAAGCATCTTCATCCTCTTCTTCTTCTCTCAATTTGACTCGATCCATCTTCTTCAGTTT AATCTTGTTCTCTTTTCAGATTCAACGGATGCATCTCCTGGGTTTTGAACATATGATTTCTCATGCTCTTCGTTTTTAGAAGGAAAGGATATGCCATTTC AGGCGTCTGTTATGTACAATAAACTTTAGATTCTAAAGCATGGAACTTTATTTACTGCCATCTCAGTACAATCAAGGAAATTAATCATGGCCCCTTCTAG GAAATCTAGAAGTGTAAATAAGAGGTTTTCTAATATCCATGAAGCTGCATCCAGTAAAGATAAAAGTGAAGAGACTGCTAGCAAGAATAAGCAGAAGGCG AGTCTTGGTACTCAGAAGAAGAGAAAATTAGCTGACATGTTAGGGCCACAATGGAATAAGGGGGAGCTTGGGCGTTTCTATGAATCTTACCGTAAATATG GGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATCGATCTATGGAAATGGTAGAAGCCCTGTACACCATGAACAGGGCATACTTATCTCTTCCAGA GGGTACTGCTTCTGCTGTTGGACTGACAGCAATGATGACAGATCATTATAGTGTACTGGGAGGGAGTTACAGTGGAAAAGAAAGCAATGAAGATGCAGAA ATATCTAAAAAGCCTAAAAAACGTTTGCGGGGAAAGCATCTAAATGACAGTAAAGCATTAGATGAATTAGATGAACACTTTTCTGATCATTCACAGTCAC ATTCCATTGCATCTGGTGATGGTTGCCTGTCATTATTGAAGAAGAGGCAGCCTGGAATTAAGCCTCATGCTGTTCGGAAAAGGACTCCTCGTGTCCCTAT TTCACATTCTATTGGTAAAGATAACGGAGAGAAGATTTTTTCATCTGCTAGGCAGCGCAACAAACAAATGGTTGACAGTAATGATGTTGCTCATAAGATT GCATTAGCATTGACAGAGGCTTCACAAAGAGGTGTCTCTTCAACTATTTCTGGATCACCAAACAAGAAAACAGTGGCATCGCCTGGTCAGAAAAGCGGAA ATAAGCGTGCTAGATCAGAAATTGCTGTATCCAAGTTTTGCAGCTCTGACCTGGATAAGGGTAGTTCTGAGTTGAGTTTAGGTAGCACAGAAGGTGATAA TGGATATTATTCTAGGGAAACAACTCATTGGAGCAGTATAGACAATACTGGAAGAGGAAGGAATCATAAAAAGAGATTAAAACACTACAATAAGAATTTA GAACCAGAGGAAAAATTAAACAAGGATTTGGATGACATAAAGGAAGCCTCCAGTGGGACAGATGATGGTAAAAATCTGAGTTTTTTCAAATCCCATTTTG ACACTGATTTTACTGATGCAAAAAAAGCTAGGTCCTCTTATAAGGGTTCCATGAAGAGAAGTAAAAACCTACTGATTGAGAAAGATGAAGGTTCTGCTTT TGATGCTCTGAAAACTTTGGCTGATCTATCTTCGATGATGCCTGAAACAAACCCTAACATTGAGCCATCTGCACAGTTCAAGGAAGGAAACCATGATATT GATGAATCTAAAATGAAAACACATAATGTACGGAAGATTGAAAACACTGCTTCAAGTAAACATGGCAAGGCTTTTTCTGACAGTATAGCTGCTGGTCATA ATTCAGAGGGAGCATACCAGCTTAATGCAGGAGGCGGGAAAAGGAAACAAAATTCTTTTACCTTGAAGGTAAGAACCGGTTATTTTCCAGCATTCAGTTG CAATATGGTTTCTCTGTATCTTCTATCTCATATTTCTCATGTATGCAAGTTTGAAGTACTTTGTTGCAGAACATTGAAACACATACTGGTTCTCTTCTAA GTGGTTCCGAACAGATCAGTATTCGTTCTCTTTTTTGATAGAAAGAGTAATATGTCATTTGCCTCTTTTGGATTTTTATTTTTTAATAAATGTTTGGTTT TTACGTTAGACAGATCTGCTAGACTTTGGATAGAAAATTGCATTTGAAATTTGAGTAGACTTATGTCTGGAATGGGAGCATTTTTAACATTTGAGTAGAC TTATGAATTGAATGTGAGTTCCATTTGAAATCAGATCAATTGATAAAATTTGAAATTTAAAGGTCATTTTTAAAATCTGATGTTAATAAGGGCACAATTC GAAAATAAAGTTCAAAATAAGGATGTAATGTGTCTTGTAGCCAATTTAATACATCATGTTCTTATGCGTTAATGTGATAATGTTTACTAGTTACAACTAA TGTGACCGACTTTTCATTAAATGTTTTTGCAATTAATAGTGGTTCATTAAATGTTTTTGCACTTAATAGTGGTAAACAAGAAAAAATATTTCAGCCGTGG GATTTTGCAGTAGCTATTTTGAAACTGAATTTTCTTCTGAAAAAGCATTTACCACTGAACGTTGCAACCTGTATTTCATAAGCTCGTCGAATTATTTTGT TTTTCTATTGCGGCTTAACCACTTAAGACATCTGTGGAGTTGCTTTTTCCGCCTTTCTTATGTATTGTTGGAGTTATAATAAAATCAGTAATTAGCATTC ACCTAGAAGCTTAATCTTGTAGGATAGTTTCATAAGAGGGCATATTAGATATAAGACATTTGATAAGTCCTCACTGAAAACTTTAAGCTGTTAAATGCTG TGAGGAGAAGACCCATTAATGATTTTATTACATCTATTTTGTCCATTATCCTTTACATTATGCATTCTTGATAAAACGTATTCTAGTTGCTTACATTTTG ATTTTGGCATTTAGAATTTTCTTTTTTGTATTTTACTTTGTTTTTCGCCAAAAAGTAAAGCTTGTACTAATTGCACTTGACATTGACTTGTATATTTCCA TTGCCATCTTATAGTATCCAAATATCATCTTCTTCATATAGGCTACTGATGAGATGAAGAAATCCATGGTTAAAGGTAAGCGGTCAAGACAACTGAAAAT GGTTAAATTCCCAGGAAAGTTGTCTTCAAGTATGAATGACAAAGGGAAAGGGGATGATTCAATTTTACCCCCCATAAAGGTTTCATCTACTAACCAAGTT AGTCTAGTGAACAAAGGAAAGTCTAGAAGAAAGATAGAAAAACCAATACCAATGGTACAGCGAGATCAAGAGGTGTCTGGAAATATTTTTAGCTGTCAAC ATAATAATTCCGCTGAATCACTCCAGAGTCGATCTTCTAGTGAAAAGGAAAAGCTTTCTAATTGCCTGTCTTCACAACGTACACGGAGATGGTGCACTTT TGAGTGGTTTTATAGTGCTATTGATTATCCGTGGTTTTCAAAGAGAGAGTTCATGGAGTACTTGGACCATGTTGGATTGGGTCATGTTCCGAGATTGACT CGCATTGAGTGGGGAGTCATTAGAAGTTCTCTTGGAAGACCACGGAGATTTTCAAAGCAGTTTTTGATAGAAGAAAAAGATAAACTTAATCAATACCGGG AATCTGTTAGATCACGTTATGCTGAAGTTCTTTCTGGTACCAATGATGGTCTTCCTACCGATTTGGCCCGGCCTTTAATTGTTGGGCAGCGTGTTATTGC CATTCATCCGAAGACAAGAGAGATCAATGATGGAAGCATACTAACTGTTGACCATTGTAGGTATCGGGTTCAGTTTGATCAGCCTGAACTCGGGGTCGAA TTTGTTATGGATATCGACTGCATGCCTTTGTATCCATTTGAAAATGTGCCCACATCTCTGATACAACATAATGTCGCTTCTGCTAGAATAGATGAGAACC TTGGTAAACTGAAGCAAGGAATGATTGTTGAGCACACAATATTGTCCCCTAGTGAAAATTCAGATACTGTTAAAGGTCTTCATGTTTCCCCCACTATGCA TGGGAGCAGTCCTTTCTCAAAACAGGGGAATTCTTCAGGCTCCAAATCACAAGCAAAAGTTGAGACTGCTAATACCCAACTAGCATTAAGTTCTCAACCT TTCATCCTTGAACATGTCCATCCAAAAGAAGCTGACATATTAGCTATTTCAGAGTTGGCTCGTGCTCTTGACAAGAAGGAACATGTCTTGTCTGAACTGA AGCACATGAATGATGGGGTATCAGAAAGCCTGAAATTTGGAGGCAACCCAGCGAAGGATACTGAGCCTTTCAAGAGAAACTATGCTCCAGTACTAAAGCA ATTAACTGAAGCGAATGAACAGGTTTCCTCTGCCTTGTTTTTCTTGAGACAACGCAACACATATCAAGGGAGCTCCTCACTTTTGTCATTAAAGCCTGTG ACTAATTCTGATGACCCTGGTGGTCAAGCTAGCTCAATCAATTGTTCAGCTTGTATCAACCAAGAATCTATATCTCATGAACATTTATCTGAAATTGTTG AAAGTTCTAGAAGAAAAGCCCAAATGTTGGTCGTACAAGCTACAAAGGCATTGTCATTTTTTAAAAAGACAGAAAGTAAGGTTGAAACAATTGAGGACAC AATAAATTTTATCAATAATCAGCTTTCAGTGGATGACCCTACTGCTTCAGCCGCAAATTCTCTTCCTGTGAATTCTATTCATGTCACACAGGCTTCTCAG GATCAACTGATTGCCAGCACATTAAATCCATTGGCAAGTTGTCATCTACAGGAAGCTGAGCTTAACAGATCATCTGACCAAAATGAATTGAACATTCCAT CAGAACTCATCTCTCATTGTCTAGCTACACTTGTCATGATTCAGAAGTGTACAGAAAGACAATTTCCCCCTGCTGATGTTGCTCAGGTACTAGATTCTGC TGTCACCAGTTTGCAGCCATTTTGTTCAAAGAATCTTCCAATATATAGCGAAATACAGAAATGCATGGGTATCATAAGAAATCAGATATTGGCACTTGTA CCTACATAGTGTGGACTCTTTCTCATTTGTTATCTGTAAATCTGCAATAATAATATTAGTCTGTGTCTGTCACCTCACTGTAACATGAGTTCATGGAGGC TGATATGACATACTTACCATTAGCCAGAGGAAATGGGAAGATTATACTGCGTCAATTCTCTTTTCAGTTGTACATATTTTTTGAAGATTGAATAATAGTA AGCTAATATGCCCTACTCTTCACCTGCATTTTGTGTACGATGTTGGCATGTTAAAATGCTAAATATTTTATTTATGCTATTGCCAATTGTGGACAGGCTT ATTACTTTTCTATATTAGTAATATATATTCCCAA
• Tissue: pods
• Gene name: LI_gene_142805;
• Additional information: details;

Expression of Ll_transcript_281883

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 0.3
• PS2: 1.1
• PS3: 0.5
• PW1: 0.4
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281883

• Blastp: Protein ALWAYS EARLY 3 from Arabidopsis with 52.61% of identity
• Blastx: Protein ALWAYS EARLY 3 from Arabidopsis with 49.63% of identity
• Eggnog: lin-9 homolog (C. elegans)(ENOG410YA1T)
• Kegg: Link to kegg annotations (AT3G21430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464007.1)
• Pfam: DIRP (PF06584.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;