Ll_transcript_281837

• Id Trinity: TRINITY_DN46185_c2_g3_i1
• Name Transcript: Ll_transcript_281837
• Sequence: GGCCCTTTACAATATGAACCGGGCGTACCTTTCTCTACCAGAGGGGACAGCTTCTGTTGTTGGTCTGATTGCAATGATGACAGATCACTATAATGTGCTG GAAGAAAGTGACAGTGAAAGGGACAGCAATGATGCACCGGGATCTCGAAAACCTGTGAAACTAAAGCGTGGAAGATTTCAGCTCAGTGTCTCAAAAGATT CTGTCCAGTCTCAGTCAATTGCTTCTGATGATGGTTGCCTATCTCTATTGAAGAGAAGACGCACTAATGGTAGCCAGCCTCGTGCAGTTGGGAAAAGGAC CCCTCGCATCCCAGTGTACTACTCCAATAAGATAGACGATGGGGAAAATCATATTTTGGCTAATAAAAGAAACCTGAAGTCAGCTTTTGATAATACTGAT GATGAGGTTGCACATGTTGCAGCTCTGGCATTAACTGAGGCTGCACAAAGAGGTGGCTCTCCCCAAATATCTCAAACACCATACACAAGATCACAGCAAA AGTCCTCTCCTGTTCAAAGCTGGGAAAGAATGCACCAGCAGTCTAAGACAGTTCCTACCAAGTTTTATGATGCTTCTATGGATGAAGAGTTCTTAGAAGG TAGTATAGAAAGCAGGGGAGCCGAAAATGGAGAATGTGCTAGAGCTACTAGTTCCTTGATGGACCTGGGATCCATAGCCACTGTCGAAGTTAATCAGAAA CGGGAAAGTAATTACAGAAAGAAAGGGAGTGTGGAAAATGTTGGAAACCATTTTCTTGATGATGGTGGAGAAGCATGTAGTGGCACTGAAGGACTTAATT TAAGTTTGAAAGGAAAAGTTGATATTGAGGTTACTAATGCAAAGCCTGAGAAATTCTCCCAAAAAGGCCAGAGGAAAAGAAGCAAGAAACTTTTGTTTGA AGATGAAGGCTCTGCCTTGGATGCTTTGCAAACTTTGGCTGATCTTTCTCTAATGATACCACCTTCTACAACGGAATCTGACTCACCTGTCCAGATGAAG GAAGAAAGAATGTATGCTGACAAAGATGTAGAGTCTGTTTTACCTGAAGCCATATCAACCAGCCAAAACAGAGATAGAATTAGACTCCCAGGTCAAAAGG CTGTTCGTGCAGTCCCTGGAGTTGAGGTTTCAACCCCCAAAAAATCTAAATTTGGAAAGGAATCAGAAAATGATATGCAGCTTCCTTCTGCTGATAGGAC ATGCAAAAGAAAGGGAAAGTCTATGGTTTCAAAGGTAGCAAATGCAAAGCCTGATTCTTATCCAACTGATCACTTAAATAATGAGGCTGGAGATGAAGAG AACAAATCGGTGATTAAAGGAAAACGCACTGATCAGACTTTCACTATAGCAAAACAATTAAAGTCAGTCAGTTCAACAGAAAGTCCTTTGTGTAGTAGTG ACACAAAAAATTTAGCAGGATCAACTGCAGAAGTCCCACTTGCAAGTGAAATTATTTTACCAACTAAGAAGAAAAGTAGACGTAAGGCAAGTTTACCGAG AGCATTCATGGCCAAAGAGAAGTGTTCTGAGAACATACTGACAAGCCAGCCTAACAGTTATTCAACTCCCATCCAGGATAATGCATTATTTTCAAAGGAA AAGCTTTCTAGTTGTTTGTCATCGTATATGTTTCGCAGATGGTGTACGTTTGAATGGTTCTATAGTGCAATTGATTATCCGTGGTTTTCCAAACAGGAGT TCATGGAATACTTAAATCATGTTGGTCTAGGGAATATCCCAAGGCTAACTCGTCTTGAATGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTT TTCTGAACACTTTCTTCATGAAGAAAGACAAAAACTAGAACAGTATCGGGAATCTGTTAGGAAACATTACACTGAATTACGGACTGGTATCAGGGATGGA CTTCCAACAGATTTAGCTAAACCTTTATATGTTGGACAACTAGTAATTGCTCTTCACCCAAAGACAAGAGAGATCCATGATGGAAGTGTGCTTACAGTTG ACCATGACAAGTGCAGGATTCAGTTTGACCGCCCAGAATTGGGTGTTGAATTTGTCAGGGATATTGATTGCATGCCTTTGAATCCATTGGAAAATATGCC AGAAGCTCTGAGGTGTCAGATTGGTGCTGGCAATATCCCTTGTATGAGTAAAGAACCACAAATGAAGGGGAATTCCAGTTTTGGTGGGTGTCTGCCGAAT GATTCAAATCGACCTGTGGAAAAGCCACCAGCGTCTTCAATCTCTCTCACTAAGCAGGGAATGGTTGGATTGCTTTTTCAATAACAAACATCAAACATTC AAACTATCATTGCACAAATTGTAGAAATAGTCTGGCATTGTATAGTTCTTTAAATTGTCATATTTTTAAAACTGGTATGATTAGCCTCTTCAATTTTTTT CCTTTTTATTGGCATAATAGAATTACTTGAACAGACTGTAGGATGATTCATAGTTCTGTTTTGAATGACTGGCTTTGTTTGAACAATGGACAAAATCACT GTGTAATCCCACTGTTTCACACTGCTGCAATTATCTGGTTTAATTTGGCCACCCGTTGATTTTCTCATCTCTTTAATCAGCATAGGTAGAACCATAAGGG TCTAGTATTGGCTCTGTTGTATCTTCCATGTTTTTCACTGTGGTTGGCTGTCCAAATTTGACATTATTAAGAGTGATGTGTCTGAAATAATTTTTTTAAA TTTCTTACAGGGGGGTGCTAACAATTCCGTTTCACAAACAAACGCTGCTATTACTAATTACCTTTGTACACAACCAGCAATATGTGCCCAACCATGTACA GTGACCGATCGTCAAACTAAGGAAGCTGATATACATGCCCTGTCTGAGTTTACACGTGCTCTAGATAAAAAGGAGAAATTAGTGACAGAACTAAAAATCG CCAATGATGACATATTGGGAAACCAAAATGGTTTAGAGTGCTTCAAGGATTCAGAGGCTTTCAAGAAGCATTATGGCATGGTTTCTGATGCACTACTTCA GTTGAGGCAACACAATTCTTACGTAGGAAACTATTTACCACCATGGATGAAGCCCCCAGTAAGTTTCAATGTTCTGGACAGTCTTCCTAGTGGTAGTGCT TTGGATAGTTCTGTGGCACAAGAGTTAGGGTCAATTGGCATTGATATTATTAAAGGATCCAGGCTTAAAGCACGTGCCATGGTCGATGCTGCATTTCAGG CCATGTCTTCAATGAAGGAAAGCGAAGATGGTTTCATGAAGATTGGGAAGACATTGGATTCTATCAACCATCAGCCTTTGGCCACGAACTCTAGCTTACC TGTGATCAGATCCCAAGAGCAAGTAAATGGCAGTTCTGATTACCATAATAGGTCAATTTTCTGTTCAGCTGAGCCCTTACCCAATGATGATGCACCTGGT CCAAAATTGCATCATGATTCTGTCAAAGTTGATACTCAAATTCCTTCAGAGCTCATAACTTCTTGTGTTGCTACATTGATCATGATACAGAATTGTACGG AACGTCAATATCCTCCCGCTGACGTGGCTCAGATTATAGATTCTGCTGTTACCAGCTTGCACCCATGCTGTCCACAAAATCTTCCTATTTACAGAGAAAT TCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTAATCCCTACTTGATTTCCTTGTTTTACTTTTCTCAAGCTGCTACATATAGGAATGTTG CTGAATGATGAGTTCAGAACTCAAATCACTTTGAAGTTCTTCACTAATCTTGTAGTTTATGTCCTTTTATATCCAGGTCAGCAGAATCAAGCACTGGTTT TAGTGATATTGTAATTGACCACCCTCCACTGCTGTTGTAAATCTATAATAAGTTTTCCTTCTGCTACAACAGCTTTTGGAGTTATCCCAGCTAAATTGGA AATTTGCTACAAATTCTGTTATAATTCAAACTCTGAAACCAGATTAATCAAAAAAAAATTGGGAACATAAGGGTATGTAGCCATAGTAATCATTAGCATT TTGATATGCTCATCATTACCCATAAATTTGTCTCAATAAATTTACATAGATAAAGTATTCCTTGTTTG
• Tissue: pods
• Gene name: LI_gene_142809;
• Additional information: details;

Expression of Ll_transcript_281837

FPKM

• PAB: 0.6
• PNAB: 4.3
• PS1: 3.5
• PS2: 4.7
• PS3: 6.8
• PW1: 1
• PW2: 1.6
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281837

• Blastp: Protein ALWAYS EARLY 2 from Arabidopsis with 47.79% of identity
• Blastx: Protein ALWAYS EARLY 2 from Arabidopsis with 46.72% of identity
• Eggnog: lin-9 homolog (C. elegans)(ENOG410YA1T)
• Kegg: Link to kegg annotations (AT3G05380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440561.1)
• Pfam: DIRP (PF06584.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;