Ll_transcript_281852

• Id Trinity: TRINITY_DN46185_c2_g3_i11
• Name Transcript: Ll_transcript_281852
• Sequence: CTGTGATTGGCTAGTCCATCTCTATTTCAAGTTTCGCGGCAACCATTTTTTTCCTCCTCCACCTTCTTTCTCTCTCTAAACCCTGCGCCACTTCTCTCTC CTCTTCTCTGCTTCAACGCCAATCGGATAAAACCCTACAATAACCGTTTATTTCCCCCCAGATAGGTAAAGGATTAATGGCACCAGCGAAGAAATCCAGA AGTGTTAGTAAGCGGTTTTCAGCTTCAAATGAGGTTTCTCCTGAGAATGATGGAGTTAACTCAATTAAAAACAAGCTACGGAAGAAAAAGTTGACTGATA AATTAGGATCTCAGTGGAGCAAGGAGGAACTAGAACAATTTTATCAAGCATACAGGAAGTATGATAAAGACTGGAAGAAGGTGGCTGCTGTTGTACGTAA CAGATCCATCGAAATGGTGGAAGCTCTTTACAACATGAATCGGGCATACCTATCTCTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCTATGATG ACAGATCACTACAATGTGCTGGTTGGGAGTGATAGTGAAAGGGAGAGCAACGATTCACCAGGATCTCGAAAACCTTTGAAACGAAAGATTGAAAAAGTTC ATCTTAGTGTCTCAAAAGATTCTGTTCAGTCTCAGTCGATTGCTTCCAGTGATGGCTGCCTCTCTCTATTGAAGAAGAGGCGCTTTGATGGTATCCAGCC TCGAGCTGTTGGGAAAAGGACACCTCGCGTCCCAGTTCACTACTCCTGTAAGAAAGATGATAGGGAAAACTATGCTTCGCCCAATCAAAGAAGCTTGGGG TCAACTGTTGTTGTTAATGATGATGAAATTGCACACGTAGCAGCATTGGCATTAGCTGAGGCAGCACAAAGGGGTGGCTCTCCCCAAGTTTCTCAAACAC CGCACATAAGAGCAGAGCATAAGTCCCCTCATGTTCAGAACTTGGAAAGAATGGGCCAAACGTTGGAGACAGCTTGTGCCAAGTTTAATCATGCTTCTGT GGATGAGGAGTTCTTGGAAGGTAGCATGGAAAGCAGGGGAGCTGAAAATGGAGAATATGTGAGAGATTCTAGTTCCTTAATGGATATGGAAGGCAAAGAC TCTGTCGTTCTTCAGAAGGGAAAAATGATTCACAGTAAGAAAGAGAGAGTGGTAAACATTGGAAACCATCAGCTTGATGATGGTGGAGAAGCATGTAGCG GCACTGAAGAAGGACTGAGTTTTAGTTCTTTGAAAGAAAAAGTTGATGTTGAGGTTAATAATGCAAAACTTGAGCAATCCTCTCTAAAAAGTAAGAGGAA AAGAAGCAAGAAACTATTTTTCGGAGATGAAATCCCTGCCTTGGATGCTTTGCAAACCTTGGCTGATGTCTCTCTAATGATGCCGGCATCTGTGGTAGTA TCTGAATCATCTGGCCAGGTGAAGGGAGACATAGTGATTGTTGATAAAGGTGATAGATCTGCTTTACCTGAAGCAGCATCGACAAGCCATACCAGAGATA AAATAAAACTCTCAGGTTCAAAACAAAAGGATGTTCATGTGGTCTCTGGAATTGAGGTTTCAACCCCCACGAAATCTAAACTTGGAAAGGAATCGGCAAA TGATACTAAAGCTCTCTATGAATCAAAAGAGCAATTTTCCCCTGTTGATAGAACATGGAAAAGAAAGCGAAATTATGTGGTTTCTAAGGTTGCAAGTACA AAGCTTAATCCTTATCCAAATGATCCCTTGAAGAGTGAGGATGTAGATGAAGAAAACAAACCTTTGTTTAAAGAAAAAAATACTGGTCAGGTTTTCACCC AACCAAGACAAAATACAGTCAGATCGCCAGAGAGTTCCCTGAATAGTGATCAGAAGGATTTAAAAGTATCAACTGCAGAAACTCCACTTTTGAGTGAAGT TAGTTTACCGATTAAAGGAAGAAGGAGATGGAAAATGATTCCACAGAGAACATTCATACCTAAGGAGAAGCGTTCTGAGAACATCATATTGAAAACTCAA CATAATATGTACTCGACCTTAAAGGATAAGCTTTCTAGTTGCATGTCATCATATCTGTTCCGCAGATGGTGTACTTTTGAATGGTTTTATAGTGCTATTG ATTATCCATGGTTTGCCAAAAGGGAATTCGTGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGACTAACTCGTGATGAGTGGAGTGTCATAAA AAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACACTTTCTACGTGAAGAAAGACAAAAACTAGAACAATATCGGGAATCAGTGAGGAAACATTACACT GCACTACGGACTGGTATCAGTGATGGACTTCCAACAGATTTAGCTAAACCATTATATGTTGGACAACGAGTAATTGCTCTTCATCCAAAAACAAGAGAGA TTCACGATGGTAGTGTGCTTACAGTTGACCATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCCCGGACATTGATTGCAT GCCTTCGAATCCATTAGATAATATGCCTGAAGCTCTGAGGAGGCAGGTCAGTGCCAGAAAAGTCTCTTTGATGAGTAAAGACCCACAGGATAATGGAAAT TCAAGTTTTGGAGGATGCACTACACGTGTTTCACCTGGGAAGGGGGATGTTAACCATTGTGTTTCTCAAGCAAAGGCTACTACAATTGATAACCTCTGTG TACAGAAAACAGTTTGTGCTCAACCATGCACAGTGACTCATCATCAAGCTAAAGAAGCTGATATACATGCACTTTCTGAGCTAAAGCGTGCTCTGGATAA AAAGGAAACATTGCTGATGGAGCTTAGAAGTGCAAATACTGACATTTTGGAGAACCAAAATGACATTGAATGCTTAAAAGATTCTGAGGCTTTCAAGAAG CATTATGCCACGGTTTCTGATGCTATGGTTCATTTGAGGCAACGCAATACTTACACTGGAAATTCTCTAACACCATGGTTGAAGCCCCAAGTTAGTTTCA ATGATCATGACAACCTTCCCGGTATGTTGGATAGTTCTTTACCACAAGAGTTAGGGTCAACCGTCAATGAAATTATTAAAGGATCCAGGCTAAGCGCAAA TGCAATGGTGGATGCTGCATTTCAGGCATTGTCTTCAACAAAGGAAGATGAAGATGCTTTCATGAGGATTGGACAGGCACTGGATTCTATTGATTATCAG CAATTAGCCTCCAACACTAGGTTACCTCTGATCAGGTCTCATGAACAAGTAAATGGCAGTTCTTATCATCATAATCAGTCAACTGGCTGTGTCTCGGTGC CTTTACTTAACGATGCATCTGATCCAAAACTGCATAATGATTCTAAGAAAGGTTACACCGAAATTCCTTTGGAGCTCATTACTTCATGTGTTGCAACATT AATCATGATACAGACTTGCACTGAACGGCAATACCCTCCGGCTGACGTGGTTCAGATGTTAGATTCTGCTGTTACTAGTTTGCAACCATGCTCTCCTCAA AACATTCCTATCTTCAGAGAAATTCAAATGTGCATAGGAAGAATTAAGACTCAGATTTTAGCTCTCGTCCCTACTTGATTTTTCTGTCCTTTATTCTCTT TAAGTAGTTTGTATAGAGAATACTGAACTACCAGTATCATATAGAAGTTCCTCACTCTATAATTTATGTTTCTCTTTTTAGTTCAATAATTTTTCTTTCA GGTCAATAGGTTCAGATGATGTTATTGATAATTGTGCAGTTCATCTGCTAGTGGGTGCGGCATTGATCAAAGAAGCAAAATAGAAAAGTGTGTTGGAGAG TGAAGTTAAAGTTACTGGGAAAACTAGTTAGCATAATCCATAAATAATGATGTATCAGACTTTGAATAATTGTTCAATTTCCTTGAAATCCATTTACTTT TGATGTATCAGATTTGTATGATTACACACGAAATCTTATAATGTGTTTTTCAGTGATTATGTGATATTTAGTTATTGGCAAGC
• Tissue: pods
• Gene name: LI_gene_142809;
• Additional information: details;

Expression of Ll_transcript_281852

FPKM

• PAB: 0.2
• PNAB: 2.2
• PS1: 2.7
• PS2: 1.8
• PS3: 6
• PW1: 3.2
• PW2: 2.8
• PW3: 2.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281852

• Blastp: Protein ALWAYS EARLY 3 from Arabidopsis with 41.57% of identity
• Blastx: Protein ALWAYS EARLY 3 from Arabidopsis with 41.57% of identity
• Eggnog: lin-9 homolog (C. elegans)(ENOG410YA1T)
• Kegg: Link to kegg annotations (AT3G21430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441176.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;