Ll_transcript_281857

• Id Trinity: TRINITY_DN46185_c2_g3_i13
• Name Transcript: Ll_transcript_281857
• Sequence: CTGTGATTGGCTAGTCCATCTCTATTTCAAGTTTCGCGGCAACCATTTTTTTCCTCCTCCACCTTCTTTCTCTCTCTAAACCCTGCGCCACTTCTCTCTC CTCTTCTCTGCTTCAACGCCAATCGGATAAAACCCTACAATAACCGTTTATTTCCCCCCAGATAGGTAAAGGATTAATGGCACCAGCGAAGAAATCCAGA AGTGTTAGTAAGCGGTTTTCAGCTTCAAATGAGGTTTCTCCTGAGAATGATGGAGTTAACTCAATTAAAAACAAGCTACGGAAGAAAAAGTTGACTGATA AATTAGGATCTCAGTGGAGCAAGGAGGAACTAGAACAATTTTATCAAGCATACAGGAAGTATGATAAAGACTGGAAGAAGGTGGCTGCTGTTGTACGTAA CAGATCCATCGAAATGGTGGAAGCTCTTTACAACATGAATCGGGCATACCTATCTCTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCTATGATG ACAGATCACTACAATGTGCTGGTTGGGAGTGATAGTGAAAGGGAGAGCAACGATTCACCAGGATCTCGAAAACCTTTGAAACGAAAGATTGAAAAAGTTC ATCTTAGTGTCTCAAAAGATTCTGTTCAGTCTCAGTCGATTGCTTCCAGTGATGGCTGCCTCTCTCTATTGAAGAAGAGGCGCTTTGATGGTATCCAGCC TCGAGCTGTTGGGAAAAGGACACCTCGCGTCCCAGTTCACTACTCCTGTAAGAAAGATGATAGGGAAAACTATGCTTCGCCCAATCAAAGAAGCTTGGGG TCAACTGTTGTTGTTAATGATGATGAAATTGCACACGTAGCAGCATTGGCATTAGCTGAGGCAGCACAAAGGGGTGGCTCTCCCCAAGTTTCTCAAACAC CGCACATAAGAGCAGAGCATAAGTCCCCTCATGTTCAGAACTTGGAAAGAATGGGCCAAACGTTGGAGACAGCTTGTGCCAAGTTTAATCATGCTTCTGT GGATGAGGAGTTCTTGGAAGGTAGCATGGAAAGCAGGGGAGCTGAAAATGGAGAATATGTGAGAGATTCTAGTTCCTTAATGGATATGGAAGGCAAAGAC TCTGTCGTTCTTCAGAAGGGAAAAATGATTCACAGTAAGAAAGAGAGAGTGGTAAACATTGGAAACCATCAGCTTGATGATGGTGGAGAAGCATGTAGCG GCACTGAAGAAGGACTGAGTTTTAGTTCTTTGAAAGAAAAAGTTGATGTTGAGGTTAATAATGCAAAACTTGAGCAATCCTCTCTAAAAAGTAAGAGGAA AAGAAGCAAGAAACTATTTTTCGGAGATGAAATCCCTGCCTTGGATGCTTTGCAAACCTTGGCTGATGTCTCTCTAATGATGCCGGCATCTGTGGTAGTA TCTGAATCATCTGGCCAGGTGAAGGGAGACATAGTGATTGTTGATAAAGGTGATAGATCTGCTTTACCTGAAGCAGCATCGACAAGCCATACCAGAGATA AAATAAAACTCTCAGGTTCAAAACAAAAGGATGTTCATGTGGTCTCTGGAATTGAGGTTTCAACCCCCACGAAATCTAAACTTGGAAAGGAATCGGCAAA TGATACTAAAGCTCTCTATGAATCAAAAGAGCAATTTTCCCCTGTTGATAGAACATGGAAAAGAAAGCGAAATTATGTGGTTTCTAAGGTTGCAAGTACA AAGCTTAATCCTTATCCAAATGATCCCTTGAAGAGTGAGGATGTAGATGAAGAAAACAAACCTTTGTTTAAAGAAAAAAATACTGGTCAGGTTTTCACCC AACCAAGACAAAATACAGTCAGATCGCCAGAGAGTTCCCTGAATAGTGATCAGAAGGATTTAAAAGTATCAACTGCAGAAACTCCACTTTTGAGTGAAGT TAGTTTACCGATTAAAGGAAGAAGGAGATGGAAAATGATTCCACAGAGAACATTCATACCTAAGGAGAAGCGTTCTGAGAACATCATATTGAAAACTCAA CATAATATGTACTCGACCTTAAAGGATAAGCTTTCTAGTTGCATGTCATCATATCTGTTCCGCAGATGGTGTACTTTTGAATGGTTTTATAGTGCTATTG ATTATCCATGGTTTGCCAAAAGGGAATTCGTGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGACTAACTCGTGATGAGTGGAGTGTCATAAA AAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACACTTTCTACGTGAAGAAAGACAAAAACTAGAACAATATCGGGAATCAGTGAGGAAACATTACACT GCACTACGGACTGGTATCAGTGATGGACTTCCAACAGATTTAGCTAAACCATTATATGTTGGACAACGAGTAATTGCTCTTCATCCAAAAACAAGAGAGA TTCACGATGGTAGTGTGCTTACAGTTGACCATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCCCGGACATTGATTGCAT GCCTTCGAATCCATTAGATAATATGCCTGAAGCTCTGAGGAGGCAGGTCAGTGCCAGAAAAGTCTCTTTGATGAGTAAAGACCCACAGGATAATGGAAAT TCAAGTTTTGGAGGATGCACTACACGTGTTTCACCTGGGAAGGGGGATGTTAACCATTGTGTTTCTCAAGCAAAGGCTACTACAATTGATAACCTCTGTG TACAGAAAACAGTTTGTGCTCAACCATGCACAGTGACTCATCATCAAGCTAAAGAAGCTGATATACATGCACTTTCTGAGCTAAAGCGTGCTCTGGATAA AAAGGAAACATTGCTGATGGAGCTTAGAAGTGCAAATACTGACATTTTGGAGAACCAAAATGACATTGAATGCTTAAAAGATTCTGAGGCTTTCAAGAAG CATTATGCCACGGTACTTGTAGAGCTGAAGGAAGCCAGTGGACAGGTTTCTGATGCTATGGTTCATTTGAGGCAACGCAATACTTACACTGGAAATTCTC TAACACCATGGTTGAAGCCCCAAGTTAGTTTCAATGATCATGACAACCTTCCCGGTATGTTGGATAGTTCTTTACCACAAGAGTTAGGGTCAACCGTCAA TGAAATTATTAAAGGATCCAGGCTAAGCGCAAATGCAATGGTGGATGCTGCATTTCAGGCATTGTCTTCAACAAAGGAAGATGAAGATGCTTTCATGAGG ATTGGACAGGCACTGGATTCTATTGATTATCAGCAATTAGCCTCCAACACTAGGTTACCTCTGATCAGGTCTCATGAACAAGTAAATGGCAGTTCTTATC ATCATAATCAGTCAACTGGCTGTGTCTCGGTGCCTTTACTTAACGATGCATCTGATCCAAAACTGCATAATGATTCTAAGAAAGGTTACACCGAAATTCC TTTGGAGCTCATTACTTCATGTGTTGCAACATTAATCATGATACAGACTTGCACTGAACGGCAATACCCTCCGGCTGACGTGGTTCAGATGTTAGATTCT GCTGTTACTAGTTTGCAACCATGCTCTCCTCAAAACATTCCTATCTTCAGAGAAATTCAAATGTGCATAGGAAGAATTAAGACTCAGATTTTAGCTCTCG TCCCTACTTGATTTTTCTGTCCTTTATTCTCTTTAAGTAGTTTGTATAGAGAATACTGAACTACCAGTATCATATAGAAGTTCCTCACTCTATAATTTAT GTTTCTCTTTTTAGTTCAATAATTTTTCTTTCAGGTCAATAGGTTCAGATGATGTTATTGATAATTGTGCAGTTCATCTGCTAGTGGGTGCGGCATTGAT CAAAGAAGCAAAATAGAAAAGTGTGTTGGAGAGTGAAGTTAAAGTTACTGGGAAAACTAGTTAGCATAATCCATAAATAATGATGTATCAGACTTTGAAT AATTGTTCAATTTCCTTGAAATCCATTTACTTTTGATGTATCAGATTTGTATGATTACACACGAAATCTTATAATGTGTTTTTCAGTGATTATGTGATAT TTAGTTATTGGCAAGC
• Tissue: pods
• Gene name: LI_gene_142809;
• Additional information: details;

Expression of Ll_transcript_281857

FPKM

• PAB: 1.5
• PNAB: 5.7
• PS1: 9.6
• PS2: 10.5
• PS3: 9.8
• PW1: 5.7
• PW2: 7.5
• PW3: 8.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281857

• Blastp: Protein ALWAYS EARLY 3 from Arabidopsis with 41.99% of identity
• Blastx: Protein ALWAYS EARLY 3 from Arabidopsis with 41.99% of identity
• Eggnog: lin-9 homolog (C. elegans)(ENOG410YA1T)
• Kegg: Link to kegg annotations (AT3G21430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441175.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;