Ll_transcript_281859

• Id Trinity: TRINITY_DN46185_c2_g3_i14
• Name Transcript: Ll_transcript_281859
• Sequence: CTGTGATTGGCTAGTCCATCTCTATTTCAAGTTTCGCGGCAACCATTTTTTTCCTCCTCCACCTTCTTTCTCTCTCTAAACCCTGCGCCACTTCTCTCTC CTCTTCTCTGCTTCAACGCCAATCGGATAAAACCCTACAATAACCGTTTATTTCCCCCCAGATAGGTAAAGGATTAATGGCACCAGCGAAGAAATCCAGA AGTGTTAGTAAGCGGTTTTCAGCTTCAAATGAGGTTTCTCCTGAGAATGATGGAGTTAACTCAATTAAAAACAAGCTACGGAAGAAAAAGTTGACTGATA AATTAGGATCTCAGTGGAGCAAGGAGGAACTAGAACAATTTTATCAAGCATACAGGAAGTATGATAAAGACTGGAAGAAGGTTTGCTTCTCTCATGCTGT TATGTCTTTCTCTTCATCCTCCTTTTTCATTTGGAAATTTGATGGCAATTATTCACGTTCTTTCTTTCTATCATTATTGTCATCATCATTGCACATTAGT GTATTATTATTCTCCTTTCTTGTTCACTTTGTTGGATTTCTAGGTGGCTGCTGTTGTACGTAACAGATCCATCGAAATGGTGGAAGCTCTTTACAACATG AATCGGGCATACCTATCTCTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCTATGATGACAGATCACTACAATGTGCTGGTTGGGAGTGATAGTG AAAGGGAGAGCAACGATTCACCAGGATCTCGAAAACCTTTGAAACGAAAGATTGAAAAAGTTCATCTTAGTGTCTCAAAAGATTCTGTTCAGTCTCAGTC GATTGCTTCCAGTGATGGCTGCCTCTCTCTATTGAAGAAGAGGCGCTTTGATGGTATCCAGCCTCGAGCTGTTGGGAAAAGGACACCTCGCGTCCCAGTT CACTACTCCTGTAAGAAAGATGATAGGGAAAACTATGCTTCGCCCAATCAAAGAAGCTTGGGGTCAACTGTTGTTGTTAATGATGATGAAATTGCACACG TAGCAGCATTGGCATTAGCTGAGGCAGCACAAAGGGGTGGCTCTCCCCAAGTTTCTCAAACACCGCACATAAGAGCAGAGCATAAGTCCCCTCATGTTCA GAACTTGGAAAGAATGGGCCAAACGTTGGAGACAGCTTGTGCCAAGTTTAATCATGCTTCTGTGGATGAGGAGTTCTTGGAAGGTAGCATGGAAAGCAGG GGAGCTGAAAATGGAGAATATGTGAGAGATTCTAGTTCCTTAATGGATATGGAAGGCAAAGACTCTGTCGTTCTTCAGAAGGGAAAAATGATTCACAGTA AGAAAGAGAGAGTGGTAAACATTGGAAACCATCAGCTTGATGATGGTGGAGAAGCATGTAGCGGCACTGAAGAAGGACTGAGTTTTAGTTCTTTGAAAGA AAAAGTTGATGTTGAGGTTAATAATGCAAAACTTGAGCAATCCTCTCTAAAAAGTAAGAGGAAAAGAAGCAAGAAACTATTTTTCGGAGATGAAATCCCT GCCTTGGATGCTTTGCAAACCTTGGCTGATGTCTCTCTAATGATGCCGGCATCTGTGGTAGTATCTGAATCATCTGGCCAGGTGAAGGGAGACATAGTGA TTGTTGATAAAGGTGATAGATCTGCTTTACCTGAAGCAGCATCGACAAGCCATACCAGAGATAAAATAAAACTCTCAGGTTCAAAACAAAAGGATGTTCA TGTGGTCTCTGGAATTGAGGTTTCAACCCCCACGAAATCTAAACTTGGAAAGGAATCGGCAAATGATACTAAAGCTCTCTATGAATCAAAAGAGCAATTT TCCCCTGTTGATAGAACATGGAAAAGAAAGCGAAATTATGTGGTTTCTAAGGTTGCAAGTACAAAGCTTAATCCTTATCCAAATGATCCCTTGAAGAGTG AGGATGTAGATGAAGAAAACAAACCTTTGTTTAAAGAAAAAAATACTGGTCAGGTTTTCACCCAACCAAGACAAAATACAGTCAGATCGCCAGAGAGTTC CCTGAATAGTGATCAGAAGGATTTAAAAGTATCAACTGCAGAAACTCCACTTTTGAGTGAAGTTAGTTTACCGATTAAAGGAAGAAGGAGATGGAAAATG ATTCCACAGAGAACATTCATACCTAAGGAGAAGCGTTCTGAGAACATCATATTGAAAACTCAACATAATATGTACTCGACCTTAAAGGATAAGCTTTCTA GTTGCATGTCATCATATCTGTTCCGCAGATGGTGTACTTTTGAATGGTTTTATAGTGCTATTGATTATCCATGGTTTGCCAAAAGGGAATTCGTGGAGTA CTTAAATCATGTTGGACTAGGGAATATCCCAAGACTAACTCGTGATGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACAC TTTCTACGTGAAGAAAGACAAAAACTAGAACAATATCGGGAATCAGTGAGGAAACATTACACTGCACTACGGACTGGTATCAGTGATGGACTTCCAACAG ATTTAGCTAAACCATTATATGTTGGACAACGAGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCACGATGGTAGTGTGCTTACAGTTGACCATGACAA GTGCAGGATTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCCCGGACATTGATTGCATGCCTTCGAATCCATTAGATAATATGCCTGAAGCTCTG AGGAGGCAGGTCAGTGCCAGAAAAGTCTCTTTGATGAGTAAAGACCCACAGGATAATGGAAATTCAAGTTTTGGAGGATGCACTACACGTGTTTCACCTG GGAAGGGGGATGTTAACCATTGTGTTTCTCAAGCAAAGGCTACTACAATTGATAACCTCTGTGTACAGAAAACAGTTTGTGCTCAACCATGCACAGTGAC TCATCATCAAGCTAAAGAAGCTGATATACATGCACTTTCTGAGCTAAAGCGTGCTCTGGATAAAAAGGAAACATTGCTGATGGAGCTTAGAAGTGCAAAT ACTGACATTTTGGAGAACCAAAATGACATTGAATGCTTAAAAGATTCTGAGGCTTTCAAGAAGCATTATGCCACGGTACTTGTAGAGCTGAAGGAAGCCA GTGGACAGGTTTCTGATGCTATGGTTCATTTGAGGCAACGCAATACTTACACTGGAAATTCTCTAACACCATGGTTGAAGCCCCAAGTTAGTTTCAATGA TCATGACAACCTTCCCGGTATGTTGGATAGTTCTTTACCACAAGAGTTAGGGTCAACCGTCAATGAAATTATTAAAGGATCCAGGCTAAGCGCAAATGCA ATGGTGGATGCTGCATTTCAGGCATTGTCTTCAACAAAGGAAGATGAAGATGCTTTCATGAGGATTGGACAGGCACTGGATTCTATTGATTATCAGCAAT TAGCCTCCAACACTAGGTTACCTCTGATCAGGTCTCATGAACAAGTAAATGGCAGTTCTTATCATCATAATCAGTCAACTGGCTGTGTCTCGGTGCCTTT ACTTAACGATGCATCTGATCCAAAACTGCATAATGATTCTAAGAAAGGTTACACCGAAATTCCTTTGGAGCTCATTACTTCATGTGTTGCAACATTAATC ATGATACAGACTTGCACTGAACGGCAATACCCTCCGGCTGACGTGGTTCAGATGTTAGATTCTGCTGTTACTAGTTTGCAACCATGCTCTCCTCAAAACA TTCCTATCTTCAGAGAAATTCAAATGTGCATAGGAAGAATTAAGACTCAGATTTTAGCTCTCGTCCCTACTTGATTTTTCTGTCCTTTATTCTCTTTAAG TAGTTTGTATAGAGAATACTGAACTACCAGTATCATATAGAAGTTCCTCACTCTATAATTTATGTTTCTCTTTTTAGTTCAATAATTTTTCTTTCAGGTC AATAGGTTCAGATGATGTTATTGATAATTGTGCAGTTCATCTGCTAGTGGGTGCGGCATTGATCAAAGAAGCAAAATAGAAAAGTGTGTTGGAGAGTGAA GTTAAAGTTACTGGGAAAACTAGTTAGCATAATCCATAAATAATGATGTATCAGACTTTGAATAATTGTTCAATTTCCTTGAAATCCATTTACTTTTGAT GTATCAGATTTGTATGATTACACACGAAATCTTATAATGTGTTTTTCAGTGATTATGTGATATTTAGTTATTGGCAAGC
• Tissue: pods
• Gene name: LI_gene_142809;
• Additional information: details;

Expression of Ll_transcript_281859

FPKM

• PAB: 0.2
• PNAB: 0.4
• PS1: 0.5
• PS2: 0.5
• PS3: 0.3
• PW1: 0.7
• PW2: 0.7
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281859

• Blastp: Protein ALWAYS EARLY 3 from Arabidopsis with 41.28% of identity
• Blastx: Protein ALWAYS EARLY 3 from Arabidopsis with 41.41% of identity
• Eggnog: lin-9 homolog (C. elegans)(ENOG410YA1T)
• Kegg: Link to kegg annotations (AT3G21430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441175.1)
• Pfam: DIRP (PF06584.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;