Ll_transcript_281869

• Id Trinity: TRINITY_DN46185_c2_g3_i17
• Name Transcript: Ll_transcript_281869
• Sequence: GGCCCTTTACAATATGAACCGGGCGTACCTTTCTCTACCAGAGGGGACAGCTTCTGTTGTTGGTCTGATTGCAATGATGACAGATCACTATAATGTGCTG GAAGAAAGTGACAGTGAAAGGGACAGCAATGATGCACCGGGATCTCGAAAACCTGTGAAACTAAAGCGTGGAAGATTTCAGCTCAGTGTCTCAAAAGATT CTGTCCAGTCTCAGTCAATTGCTTCTGATGATGGTTGCCTATCTCTATTGAAGAGAAGACGCACTAATGGTAGCCAGCCTCGTGCAGTTGGGAAAAGGAC CCCTCGCATCCCAGTGTACTACTCCAATAAGATAGACGATGGGGAAAATCATATTTTGGCTAATAAAAGAAACCTGAAGTCAGCTTTTGATAATACTGAT GATGAGGTTGCACATGTTGCAGCTCTGGCATTAACTGAGGCTGCACAAAGAGGTGGCTCTCCCCAAATATCTCAAACACCATACACAAGATCACAGCAAA AGTCCTCTCCTGTTCAAAGCTGGGAAAGAATGCACCAGCAGTCTAAGACAGTTCCTACCAAGTTTTATGATGCTTCTATGGATGAAGAGTTCTTAGAAGG TAGTATAGAAAGCAGGGGAGCCGAAAATGGAGAATGTGCTAGAGCTACTAGTTCCTTGATGGACCTGGGATCCATAGCCACTGTCGAAGTTAATCAGAAA CGGGAAAGTAATTACAGAAAGAAAGGGAGTGTGGAAAATGTTGGAAACCATTTTCTTGATGATGGTGGAGAAGCATGTAGTGGCACTGAAGGACTTAATT TAAGTTTGAAAGGAAAAGTTGATATTGAGGTTACTAATGCAAAGCCTGAGAAATTCTCCCAAAAAGGCCAGAGGAAAAGAAGCAAGAAACTTTTGTTTGA AGATGAAGGCTCTGCCTTGGATGCTTTGCAAACTTTGGCTGATCTTTCTCTAATGATACCACCTTCTACAACGGAATCTGACTCACCTGTCCAGATGAAG GAAGAAAGAATGTATGCTGACAAAGATGTAGAGTCTGTTTTACCTGAAGCCATATCAACCAGCCAAAACAGAGATAGAATTAGACTCCCAGGTCAAAAGG CTGTTCGTGCAGTCCCTGGAGTTGAGGTTTCAACCCCCAAAAAATCTAAATTTGGAAAGGAATCAGAAAATGATATGCAGCTTCCTTCTGCTGATAGGAC ATGCAAAAGAAAGGGAAAGTCTATGGTTTCAAAGGTAGCAAATGCAAAGCCTGATTCTTATCCAACTGATCACTTAAATAATGAGGCTGGAGATGAAGAG AACAAATCGGTGATTAAAGGAAAACGCACTGATCAGACTTTCACTATAGCAAAACAATTAAAGTCAGTCAGTTCAACAGAAAGTCCTTTGTGTAGTAGTG ACACAAAAAATTTAGCAGGATCAACTGCAGAAGTCCCACTTGCAAGTGAAATTATTTTACCAACTAAGAAGAAAAGTAGACGTAAGGCAAGTTTACCGAG AGCATTCATGGCCAAAGAGAAGTGTTCTGAGAACATACTGACAAGCCAGCCTAACAGTTATTCAACTCCCATCCAGGATAATGCATTATTTTCAAAGGAA AAGCTTTCTAGTTGTTTGTCATCGTATATGTTTCGCAGATGGTGTACGTTTGAATGGTTCTATAGTGCAATTGATTATCCGTGGTTTTCCAAACAGGAGT TCATGGAATACTTAAATCATGTTGGTCTAGGGAATATCCCAAGGCTAACTCGTCTTGAATGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTT TTCTGAACACTTTCTTCATGAAGAAAGACAAAAACTAGAACAGTATCGGGAATCTGTTAGGAAACATTACACTGAATTACGGACTGGTATCAGGGATGGA CTTCCAACAGATTTAGCTAAACCTTTATATGTTGGACAACTAGTAATTGCTCTTCACCCAAAGACAAGAGAGATCCATGATGGAAGTGTGCTTACAGTTG ACCATGACAAGTGCAGGATTCAGTTTGACCGCCCAGAATTGGGTGTTGAATTTGTCAGGGTAACATGGTTTCATATTTTCACACTGTTTTTTAAATATCA TAGCTATTCTTCAGGTGTTTTTAAATAAGGCCAGATGTTCTTCCTCATTATATACAAAGACTCTTTCTGTGGCATGCTGTAAATAAAATATAATTCTTTT TTTCCCAATAGAAGAAACATGTCATAATTTTCCTGAAATCAGATTCAGAAACTTGTTTTTTTTTTTACATTTTCTTCGTACTTTTACTGAGTGAAATTTG GGTTCAGGATATTGATTGCATGCCTTTGAATCCATTGGAAAATATGCCAGAAGCTCTGAGGTGTCAGATTGGTGCTGGCAATATCCCTTGTATGAGTAAA GAACCACAAATGAAGGGGAATTCCAGTTTTGGTGGGTGTCTGCCGAATGATTCAAATCGACCTGTGGAAAAGCCACCAGCGTCTTCAATCTCTCTCACTA AGCAGGGAATGGTTGGATTGCTTTTTCAATAACAAACATCAAACATTCAAACTATCATTGCACAAATTGTAGAAATAGTCTGGCATTGTATAGTTCTTTA AATTGTCATATTTTTAAAACTGGTATGATTAGCCTCTTCAATTTTTTTCCTTTTTATTGGCATAATAGAATTACTTGAACAGACTGTAGGATGATTCATA GTTCTGTTTTGAATGACTGGCTTTGTTTGAACAATGGACAAAATCACTGTGTAATCCCACTGTTTCACACTGCTGCAATTATCTGGTTTAATTTGGCCAC CCGTTGATTTTCTCATCTCTTTAATCAGCATAGGTAGAACCATAAGGGTCTAGTATTGGCTCTGTTGTATCTTCCATGTTTTTCACTGTGGTTGGCTGTC CAAATTTGACATTATTAAGAGTGATGTGTCTGAAATAATTTTTTTAAATTTCTTACAGGGGGGTGCTAACAATTCCGTTTCACAAACAAACGCTGCTATT ACTAATTACCTTTGTACACAACCAGCAATATGTGCCCAACCATGTACAGTGACCGATCGTCAAACTAAGGAAGCTGATATACATGCCCTGTCTGAGTTTA CACGTGCTCTAGATAAAAAGGAGAAATTAGTGACAGAACTAAAAATCGCCAATGATGACATATTGGGAAACCAAAATGGTTTAGAGTGCTTCAAGGATTC AGAGGCTTTCAAGAAGCATTATGGCATGGTTTCTGATGCACTACTTCAGTTGAGGCAACACAATTCTTACGTAGGAAACTATTTACCACCATGGATGAAG CCCCCAGTAAGTTTCAATGTTCTGGACAGTCTTCCTAGTGGTAGTGCTTTGGATAGTTCTGTGGCACAAGAGTTAGGGTCAATTGGCATTGATATTATTA AAGGATCCAGGCTTAAAGCACGTGCCATGGTCGATGCTGCATTTCAGGCCATGTCTTCAATGAAGGAAAGCGAAGATGGTTTCATGAAGATTGGGAAGAC ATTGGATTCTATCAACCATCAGCCTTTGGCCACGAACTCTAGCTTACCTGTGATCAGATCCCAAGAGCAAGTAAATGGCAGTTCTGATTACCATAATAGG TCAATTTTCTGTTCAGCTGAGCCCTTACCCAATGATGATGCACCTGGTCCAAAATTGCATCATGATTCTGTCAAAGTTGATACTCAAATTCCTTCAGAGC TCATAACTTCTTGTGTTGCTACATTGATCATGATACAGAATTGTACGGAACGTCAATATCCTCCCGCTGACGTGGCTCAGATTATAGATTCTGCTGTTAC CAGCTTGCACCCATGCTGTCCACAAAATCTTCCTATTTACAGAGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTAATCCCTACT TGATTTCCTTGTTTTACTTTTCTCAAGCTGCTACATATAGGAATGTTGCTGAATGATGAGTTCAGAACTCAAATCACTTTGAAGTTCTTCACTAATCTTG TAGTTTATGTCCTTTTATATCCAGGTCAGCAGAATCAAGCACTGGTTTTAGTGATATTGTAATTGACCACCCTCCACTGCTGTTGTAAATCTATAATAAG TTTTCCTTCTGCTACAACAGCTTTTGGAGTTATCCCAGCTAAATTGGAAATTTGCTACAAATTCTGTTATAATTCAAACTCTGAAACCAGATTAATCAAA AAAAAATTGGGAACATAAGGGTATGTAGCCATAGTAATCATTAGCATTTTGATATGCTCATCATTACCCATAAATTTGTCTCAATAAATTTACATAGATA AAGTATTCCTTGTTTG
• Tissue: pods
• Gene name: LI_gene_142809;
• Additional information: details;

Expression of Ll_transcript_281869

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.2
• PS3: 0.2
• PW1: 0.1
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281869

• Blastp: Protein ALWAYS EARLY 2 from Arabidopsis with 47.16% of identity
• Blastx: Protein ALWAYS EARLY 2 from Arabidopsis with 46.02% of identity
• Eggnog: lin-9 homolog (C. elegans)(ENOG410YA1T)
• Kegg: Link to kegg annotations (AT3G05380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440561.1)
• Pfam: DIRP (PF06584.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;